Sequence of DPV Faba bean necrotic stunt virus

Faba bean necrotic stunt virus isolate Mor5 segment DNA-U2, complete sequence.

ACC No: GQ274037

Dated: 2010-01-19 | Length: 978 | CRC: 1088133796

                
ID   GQ274037; SV 1; circular; genomic DNA; STD; VRL; 978 BP.
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AC   GQ274037;
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DT   19-JAN-2010 (Rel. 103, Created)
DT   19-JAN-2010 (Rel. 103, Last updated, Version 1)
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DE   Faba bean necrotic stunt virus isolate Mor5 segment DNA-U2, complete
DE   sequence.
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KW   .
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OS   Faba bean necrotic stunt virus
OC   Viruses; ssDNA viruses; Nanoviridae; Nanovirus.
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RN   [1]
RP   1-978
RA   Abraham A.D., Bencharki B., Torok V., Katul L., Varrelmann M., Vetten H.J.;
RT   "Two distinct nanovirus species infecting faba bean in Morocco";
RL   Arch. Virol. 155(1):37-46(2010).
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RN   [2]
RP   1-978
RA   Abraham A.D., Bencharki B., Torok V., Katul L., Varrelmann M., Vetten J.H.;
RT   ;
RL   Submitted (14-JUN-2009) to the EMBL/GenBank/DDBJ databases.
RL   Biotechnology Program, Ethiopian Institute of Agricultural Research, Addis
RL   Ababa 2003, Ethiopia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .978
FT                   /organism="Faba bean necrotic stunt virus"
FT                   /segment="DNA-U2"
FT                   /host="Vicia faba (faba bean)"
FT                   /isolate="Mor5"
FT                   /mol_type="genomic DNA"
FT                   /country="Morocco"
FT                   /isolation_source="plant tissue"
FT                   /collected_by="Bouchaiv Bencharki"
FT                   /collection_date="Jun-2001"
FT                   /db_xref="taxon:283824"
FT   CDS             326. .691
FT                   /codon_start=1
FT                   /product="U2 protein"
FT                   /protein_id="ACX50515.1"
FT                   /translation="MAIDYEYNLSMREIMTMKEEQDRFWSSYHDFLRAYEDVLGEFCRR
FT                   HGRRVLAYPRLPSYAPTRLVLKTRTVYDIRLEECKSCISEFNASSCNNYNSSEGLADLN
FT                   DYGNYRYQVYYSEPSCN"
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SQ   Sequence 978 BP; 289 A; 174 C; 204 G; 311 T; 0 other;

gq274037 Length: 978  19-JAN-2010  Type: N  Check: 9438  ..

       1  acccccgccc caggatcagc ggagtcatca cgtgacacgc acatgctatt
      51  aaatgaattc aaattaaata agtgggggat ggtccccact ccgcactaac
     101  tattcaatac actgaacata tgctttgctt cgtcacgaag caaagatgaa
     151  gaataattgc tgtccccaca acgctttatt cgttgtgctt tactttcaaa
     201  cgagtggctg agattgaatc caagttctca agcgtacaca ggaagcttgt
     251  ttgtttctct ataaattcag atcgtctgaa ttttatattc aggtcttctt
     301  cttccatctc tcttatttgg tattgatggc tatcgattac gagtataatc
     351  tttctatgag agagattatg acaatgaaag aagaacaaga cagattctgg
     401  agctcgtatc atgattttct tcgtgcatac gaagatgttc ttggagaatt
     451  ttgcagacgc catggaagaa gagtcctagc atacccaagg ttacccagtt
     501  atgcacctac acggttggtt ctgaagacta gaactgttta tgatattaga
     551  ttagaagaat gtaaatcttg tatttcagaa tttaatgcta gttcttgtaa
     601  taactataat agttcggaag gcttagctga cttaaatgat tatggtaatt
     651  atagatatca agtttattat tcagaacctt catgtaatta agttagattt
     701  atctaaatcg aagcataaat gatgtgttca ttaagttatg atttgttgtt
     751  gttgatgcgt aatcgttgtg ttgttatgaa ccagagagtc tgaaggtaga
     801  agacaactac tttacacatg taagcacggg attggttaat attatttggg
     851  tttactccgc gtagcggtat gcttcagccc aataggccca atagtctcaa
     901  ggcccaatag aaatgaccaa taggaatgaa gcatgacgtc atttgatccc
     951  gtgctgagct ggggcggggc ttagtatt