Sequence of DPV Grapevine fanleaf virus
Grapevine fanleaf virus isolate WAME1492 segment RNA2 polyprotein mRNA, complete cds.
ACC No: GQ332370
Dated: 2009-12-08 | Length: 3773 | CRC: -493743420
ID GQ332370; SV 1; linear; mRNA; STD; VRL; 3773 BP.
XX
AC GQ332370;
XX
DT 08-DEC-2009 (Rel. 103, Created)
DT 08-DEC-2009 (Rel. 103, Last updated, Version 1)
XX
DE Grapevine fanleaf virus isolate WAME1492 segment RNA2 polyprotein mRNA,
DE complete cds.
XX
KW .
XX
OS Grapevine fanleaf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales;
OC Secoviridae; Comovirinae; Nepovirus; Subgroup A.
XX
RN [1]
RP 1-3773
RX PUBMED; 19900006.
RA Mekuria T.A., Gutha L.R., Martin R.R., Naidu R.A.;
RT "Genome Diversity and Intra- and Interspecies Recombination Events in
RT Grapevine fanleaf virus";
RL Phytopathology 99(12):1394-1402(2009).
XX
RN [2]
RP 1-3773
RA Mekuria T.A., Gutha L.R., Martin R.R., Naidu R.A.;
RT ;
RL Submitted (27-JUN-2009) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, Washington State University, Prosser, WA 99350, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .3773
FT /organism="Grapevine fanleaf virus"
FT /segment="RNA2"
FT /host="Vitis vinifera cultivar Merlot"
FT /isolate="WAME1492"
FT /mol_type="mRNA"
FT /country="USA"
FT /collection_date="2008"
FT /db_xref="taxon:12274"
FT CDS 229. .3561
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="ACZ58630.1"
FT /translation="MGKFYYSNRRLACWAAGKNPHLGGSVEQWLAAINTDPSFRQTVKE
FT DVQENREQPTAVRMFSWKIGFGPIDNPERCDWHFVLTGERPTQPSRPVKADEVVVVPQP
FT KKVVIPSPPPPPAPYFRAVGAFAPTRSGFIRATVERLTREREESRAAALFAELPLEYPQ
FT GNPLKLSLAMRFAMLKHTTWRKWYDASDERLLKAHPGGPCLPPPPPVQSPPTFRERVRE
FT YCRMKSCARVFALETSLGLNKAWVGLVDIPSTSVCCADGRTTGGQTIAQEADPLQHRVS
FT TSVAPGRAQWISERRQALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLL
FT PPLRSAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMS
FT AVVIDALEIAINPFGMPGNPTDLTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPG
FT LQYSQEEPRRESIIRLYVASTNATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQ
FT VQGTTLRATMMGNTVVVSPEGSLVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFS
FT IRSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVVYIPKDCQANRYLGTLNIRDMI
FT SDFKGVQYEKWITAGLVMPTFKIVVRLPANAFTGLTWVMSFDAYNRITSRITASADPVY
FT TLSVPHWLIHHKLGTFSCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQ
FT AVVELYAELEEATSFLGKPTLVFDPGVFDGKFQFLTCPPIFFDLTAVTALKSAGLTLGQ
FT VPMVGTTKVYNLNSALVSCVLGMGGTIRGRVHICAPIFYSIVLWVVSEWNGTTMDWNEL
FT FKYPGVYVEEDGSFEVKIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPSGETARL
FT PIVVQIDEIVRPDFSLPSFGDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSMGE
FT NPFAAMIACHGLHSGVLDLKLQWSLNTEFGKSSGSVTVTKLVGDKAMGLDGPSQVFAIQ
FT KLEGVTDLLIGNFAGANPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTS
FT FPV"
XX
SQ Sequence 3773 BP; 916 A; 786 C; 963 G; 1108 T; 0 other;
gq332370 Length: 3773 08-DEC-2009 Type: N Check: 9792 ..
1 atgaaaaatg tttacgtttt cttacgttac cgtgatttca ctttttcttt
51 gccaagagtt taagaaactc aaaagtgaaa ctgccaagag tttaagaaac
101 tcaaaagcga agagtttaag aaactcacca ttgcttttcc attcttttat
151 tttgcgctct atttgtttag cattttattt ggtttgtttg aaaagctttt
201 gttttgtttt cattttcttt ttgcccttat gggcaaattt tattattcca
251 acaggcgact tgcctgttgg gctgctggga agaaccctca tcttgggggt
301 tctgttgagc aatggctggc ggccattaat actgatccct ccttccgcca
351 aactgttaag gaggacgttc aggaaaacag agaacagcca actgctgttc
401 gaatgttttc ctggaaaatt gggttcgggc ccattgacaa tcccgagaga
451 tgcgattggc atttcgtcct tacgggcgaa aggccaacgc aaccgtcccg
501 gccggttaaa gccgatgagg ttgtggtggt gccacaaccg aagaaggtgg
551 tgatcccttc accacctcct cccccagctc cctactttag ggctgttggg
601 gcttttgcac caacccggtc cgggtttatt cgggccactg tggaaaggct
651 cacccgggaa cgggaggagt cgagagctgc ggcactcttt gccgaactgc
701 cattggagta cccgcagggt aatcctctga agttgagtct ggcgatgcga
751 tttgccatgc tcaaacatac cacttggcgg aagtggtatg acgctagtga
801 tgagcgcctc ttgaaagctc atcctggcgg tccttgtctt ccgccccctc
851 ccccagtcca aagtccaccc acttttagag agagggtgag ggagtattgc
901 aggatgaagt cctgcgccag ggtttttgcc ttggaaacct ccctaggtct
951 taataaggcc tgggtaggtt tagtggacat ccccagcact tccgtgtgct
1001 gtgcagatgg gaggactacc ggtgggcaaa caattgctca agaagctgat
1051 cccttgcaac atagggtcag cacatctgta gcccccggta gggcacaatg
1101 gatctctgag cgcagacagg ctctgcgaag gagagagcag gcaaatagcc
1151 tgcagggtct tgctgctcaa actgatatga cttttgagca ggccaggaat
1201 gcttaccttg gtgctgctga tatgattgag caaggtctac cactacttcc
1251 ccctctacgt agtgcttatg cccctagggg tttgtggagg gggccctcga
1301 ccagagccaa ttacacgtta gactttaggc tcaatggtat tccgactggg
1351 acaaacacat tggagatatt gtataatcct gtgtcggagg aagagatgga
1401 agaataccgg gataggggca tgtcagccgt ggtgattgat gcactggaga
1451 tagccataaa tccatttggc atgcccggga atccaacgga tttgaccgtc
1501 gtggcaacat atgggcatga gcgagatatg acacgcgcct ttattggatc
1551 tgcttccaca ttcctaggga atgggttagc tagagccatt ttctttcctg
1601 gcttacaata tagccaggag gaaccgaggc gcgaatctat aattcgcctg
1651 tatgttgcct ctaccaatgc cactgtagat acagattcag ttttggcggc
1701 cattagtgtt ggtactttgc gtcaacacgt tggctccatg cattatcgaa
1751 ctgtggctag tactgtgcat caagctcagg tgcaaggaac aacactcagg
1801 gctactatga tgggtaatac tgttgtagtg tcacctgaag gaagtctggt
1851 tactggaacc cctgaggcaa gagttgaaat tgggggcggt tctagtatta
1901 ggatggtggg acctctgcaa tgggagagtg tagaggaacc tgggcaaacc
1951 ttctctatca gaagtcgttc acggtcagtg aggattgata gaaatgttga
2001 tcttcctcag cttgaggctg agcctaggtt gagctcaacc gtgagaggat
2051 tagctggtag aggagtggtt tatattccca aggattgcca ggcaaatagg
2101 tacttgggca ccctaaacat acgtgatatg atctcagatt ttaagggtgt
2151 ccaatatgaa aaatggataa ctgcaggact agtcatgcct actttcaaaa
2201 ttgtcgtcag gctacctgca aatgccttta ctggtttgac gtgggtgatg
2251 agcttcgatg cttataatcg gataactagt agaatcactg ctagtgcaga
2301 tcctgtatac accttgtcag tcccacactg gcttatccat cataagttag
2351 gcacgttttc atgcgagata gactatggag aattgtgtgg tcatgctatg
2401 tggtttaagt ccacgacatt tgaatctcca aggctacatt tcacatgttt
2451 aacgggcaat aataaagagt tggcggcaga ctggcaagct gtcgtggaac
2501 tatatgccga actggaggag gccacctctt ttcttgggaa accaactttg
2551 gtttttgacc caggcgtctt tgatggcaaa ttccagtttc ttacttgccc
2601 tcctatattc tttgatctaa cagccgtcac agctcttaag agtgctgggc
2651 tgacattggg acaagtccca atggttggca ccaccaaagt ttataacttg
2701 aacagtgctc ttgtgagctg tgttttgggt atgggaggta ctatcagagg
2751 aagggtacac atttgtgcgc caatattcta tagtattgtt ttatgggttg
2801 ttagtgagtg gaacgggacc acgatggatt ggaacgaact tttcaagtat
2851 cctggggtgt atgtggaaga agatggaagc tttgaagtta aaattcgctc
2901 tccatatcac cggacgcctg ctagattgct tgccggtcaa agccagaggg
2951 acatgagctc tctgaatttt tatgcaatag caggacctat agctccatcg
3001 ggtgagactg cacgacttcc tattgttgtt caaatcgatg agatcgtgcg
3051 cccagatttt tctctgccaa gttttggaga tgattatttt gtgtgggtgg
3101 atttttctga gttcactctt gacaaagaag aaattgagat tggttctcgt
3151 ttctttgatt ttacttcaaa tacttgtagg gtgtctatgg gagaaaaccc
3201 gttcgctgca atgattgcct gtcatggact gcatagtggt gttttagacc
3251 tcaaactcca atggagtctg aacactgaat ttggcaagag cagtgggagt
3301 gttactgtta caaagctagt tggcgataag gccatgggtc tggatggacc
3351 ttcccaggtt tttgccatac aaaaactaga gggagttaca gatttgttaa
3401 ttgggaattt tgcaggagca aatcctaata ctcatttctc tctctatagt
3451 cgatggatgg caataaagtt ggaccaagca aagagtatca aagtactccg
3501 cgttttgtgt aagccccgtc caggtttcag cttttatgga agaactagct
3551 tcccagtcta gggtatctga ctttaaaaga cccaagtgtg catgcgtgtt
3601 ttattaatta tgtgtgttat tttgtgttat agtttgtttt aacttgttta
3651 ctgctttagt gtgtttaatt tcatgctttt agtggcgaca gtgtgttgtt
3701 tgtcctttgg acacacttgc cttgttggac acaaaaagat ttttcctttc
3751 tttttactgt tttgcaaatt tat