Sequence of DPV Soybean mosaic virus

Soybean mosaic virus strain C7 P3 protein gene, partial cds.

ACC No: GQ491069

Dated: 2011-09-04 | Length: 1041 | CRC: 265068031

                
ID   GQ491069; SV 1; linear; genomic RNA; STD; VRL; 1041 BP.
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AC   GQ491069;
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DT   31-AUG-2011 (Rel. 109, Created)
DT   04-SEP-2011 (Rel. 110, Last updated, Version 2)
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DE   Soybean mosaic virus strain C7 P3 protein gene, partial cds.
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KW   .
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OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1041
RA   Yang Q.H., Gai J.Y.;
RT   "Homological Analysis of P3 Gene between Soybean Mosaic Virus Strains in
RT   China and Sixteen Potyviruses";
RL   Unpublished.
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RN   [2]
RP   1-1041
RA   Yang Q.H., Gai J.Y.;
RT   ;
RL   Submitted (16-AUG-2009) to the INSDC.
RL   National Center for Soybean Improvement, Nanjing Agricultural University,
RL   Weigang No.1, Nanjing, Jiangsu 210095, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1041
FT                   /organism="Soybean mosaic virus"
FT                   /host="soybean"
FT                   /strain="C7"
FT                   /serotype="positive"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Shanghai"
FT                   /collection_date="May-2004"
FT                   /PCR_primers="fwd_seq: ctaatgaccttcagagcgagat, rev_seq:
FT                   accgcatcactcctttca"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>1041
FT                   /codon_start=1
FT                   /product="P3 protein"
FT                   /protein_id="ADM43430.1"
FT                   /translation="GEVQQRMKCETALITSIFKPKRMVQILENDPYILLMGLVSPSILI
FT                   HMYRMKHFEKGVELWISKEHSVAKIFIILEQLTKRVAANDVLLEQLEMISETSERFMSI
FT                   LEDCPQAPQSYKTAQDLLTMYIERKASNSQLVENGFVDMNDKLYVAYEKIYSDRLKQEW
FT                   RALSWLEKFSITWQLKRFAPHTEKCLTKKVVEESSASSGNFASVCFMNAQSHLRSVRNT
FT                   LFQKCDQAWTASVRAFVRFIISTLHRCYSDIVYLVNICIIFSLLVQMTSVLQGIVNTAR
FT                   RDKALLNGWKRKEDEEAVIHLYEMCEKMEGGHPSIEKFLGHVKEVRPDLLSVATSMTGQ
FT                   SEDVSAQ"
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SQ   Sequence 1041 BP; 347 A; 176 C; 249 G; 269 T; 0 other;

gq491069 Length: 1041  04-SEP-2011  Type: N  Check: 3540  ..

       1  ggtgaagtgc aacagaggat gaagtgtgaa acagcactca taacaagcat
      51  tttcaagcct aagaggatgg ttcaaattct tgaaaatgac ccatacattc
     101  ttttgatggg cctagtttca ccttctatat tgatccacat gtatcgaatg
     151  aagcactttg agaaaggggt ggagttgtgg ataagtaaag aacatagtgt
     201  ggcaaagatc tttatcatat tggaacaact cacaaagaga gttgctgcaa
     251  atgatgtgtt acttgagcaa cttgaaatga tttcagaaac ctctgagaga
     301  ttcatgagca tcttagagga ctgccctcaa gcgccacaat catacaagac
     351  agcacaagac ttgttgacaa tgtacataga aagaaaagca tccaacagtc
     401  aactggtgga gaatggattt gtagatatga atgacaagtt gtatgtggca
     451  tatgaaaaaa tctattcaga tcgcttgaag caggaatggc gcgcgctaag
     501  ctggttggaa aaattttcta taacatggca attgaaaaga tttgctccac
     551  atacggagaa atgtttgaca aagaaagttg tagaagaaag cagcgcatct
     601  tcaggaaact ttgcgagtgt gtgcttcatg aatgcccagt cacacctcag
     651  aagtgtaaga aatacacttt ttcaaaaatg tgaccaggct tggactgcat
     701  cggtgcgagc ctttgtaagg ttcataatat caacactcca taggtgctat
     751  agtgatatag tctatctggt gaacatctgt ataatctttt cattgcttgt
     801  ccagatgact agtgtactgc agggcattgt gaacacagca aggagggaca
     851  aggcactcct aaatggatgg aaaagaaaag aggatgaaga ggctgtgatt
     901  catttgtatg agatgtgtga aaagatggaa ggcggacatc caagtattga
     951  gaagtttttg ggccatgtca aagaagttag acctgatctg ctctctgtag
    1001  caacaagcat gacaggacaa tcagaagacg tttctgcaca g