Sequence of DPV Soybean mosaic virus

Soybean mosaic virus strain C15 P3 protein gene, partial cds.

ACC No: GQ491077

Dated: 2011-09-04 | Length: 1041 | CRC: -245280393

                
ID   GQ491077; SV 1; linear; genomic RNA; STD; VRL; 1041 BP.
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AC   GQ491077;
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DT   31-AUG-2011 (Rel. 109, Created)
DT   04-SEP-2011 (Rel. 110, Last updated, Version 2)
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DE   Soybean mosaic virus strain C15 P3 protein gene, partial cds.
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KW   .
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OS   Soybean mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1041
RA   Yang Q.H., Gai J.Y.;
RT   "Homological Analysis of P3 Gene between Soybean Mosaic Virus Strains in
RT   China and Sixteen Potyviruses";
RL   Unpublished.
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RN   [2]
RP   1-1041
RA   Yang Q.H., Gai J.Y.;
RT   ;
RL   Submitted (17-AUG-2009) to the INSDC.
RL   National Center for Soybean Improvement, Nanjing Agricultural University,
RL   Weigang No.1, Nanjing, Jiangsu 210095, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1041
FT                   /organism="Soybean mosaic virus"
FT                   /host="soybean"
FT                   /strain="C15"
FT                   /serotype="positive"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Liaoning"
FT                   /collection_date="Jul-2003"
FT                   /PCR_primers="fwd_seq: ctaatgaccttcagagcgagat, rev_seq:
FT                   accgcatcactcctttca"
FT                   /db_xref="taxon:12222"
FT   CDS             <1. .>1041
FT                   /codon_start=1
FT                   /product="P3 protein"
FT                   /protein_id="ADM43438.1"
FT                   /translation="GEVQQRMKCETALITSIFKPKRMVQILENDPYILLMGLVSPSILI
FT                   HMYRMKHFEKGVELWISKEHSVAKIFIILEQLTKRVAANDVLLEQLEMISETSERFMSI
FT                   LEDCPQAPHSYKTAKDLLTMYIERKASNNQLVENGFVDMNDKLYMAYEKIYSDRLKQEW
FT                   RALSWLEKFSITWQLKRFAPHTEKCLTKKVVEESSASSGNFASVCFMNAQSHLRNVRNI
FT                   LFQKCDQVWTASVRAFVRLIISTLHRCYSDIVYLVNICIIFSLLVQMTSVLQGIVNTAR
FT                   RDKALLNGWKRKEDEEAVIHLYEMCEKMEGGHPSIEKFLDHVKGVRPDLLPVAVNMTGQ
FT                   SEDVSAQ"
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SQ   Sequence 1041 BP; 350 A; 170 C; 243 G; 278 T; 0 other;

gq491077 Length: 1041  04-SEP-2011  Type: N  Check: 6119  ..

       1  ggtgaagtgc aacagagaat gaagtgtgaa acagcactta taacaagcat
      51  tttcaaacct aagagaatgg ttcaaatcct tgaaaatgac ccatacattc
     101  tcttgatggg cttggtttca ccttctatct tgattcacat gtatcgtatg
     151  aagcattttg agaaaggggt ggagttgtgg ataagtaaag aacatagtgt
     201  ggcaaagatt ttcatcatat tggaacaact cactaagagg gtcgctgcaa
     251  atgatgtgct acttgagcaa cttgaaatga tttcagaaac ttctgagagg
     301  ttcatgagta tcttagagga ttgccctcaa gcaccacatt catacaagac
     351  agcaaaagat ttgttgacaa tgtacataga aaggaaagca tccaacaacc
     401  aattggtgga gaatggtttt gtagatatga atgataaatt gtatatggca
     451  tatgaaaaaa tctactcaga tcgcttgaag caggaatggc gcgcattaag
     501  ctggttggaa aaattttcta taacatggca attgaaaagg tttgctccac
     551  atacggagaa atgtttgaca aagaaagttg tagaagaaag cagcgcatct
     601  tcaggaaact ttgcgagtgt gtgcttcatg aatgcccagt cacacctaag
     651  aaatgtaaga aatatacttt tccaaaaatg tgaccaggtt tggacagcat
     701  cggtgcgagc ctttgtgagg ttgataattt caacacttca caggtgctac
     751  agtgatatag tttatctggt gaacatctgc ataatctttt cattgcttgt
     801  ccaaatgact agtgtgctgc agggcattgt caacacagca aggagagaca
     851  aagcactctt aaatggatgg aaaaggaaag aagatgaaga ggccgtgatt
     901  catttgtatg aaatgtgtga aaagatggaa ggtggacatc caagtattga
     951  gaaatttttg gatcatgtca agggagttag acctgaccta ctccctgtag
    1001  cagtgaacat gacaggacaa tcagaagatg tctccgcaca g