Sequence of DPV Hippeastrum mosaic virus

Amaryllis potyvirus strain 21221 polyprotein gene, partial cds.

ACC No: GQ844296

Dated: 2009-10-02 | Length: 1482 | CRC: -500228050

                
ID   GQ844296; SV 1; linear; genomic RNA; STD; VRL; 1482 BP.
XX
AC   GQ844296;
XX
DT   02-OCT-2009 (Rel. 102, Created)
DT   02-OCT-2009 (Rel. 102, Last updated, Version 1)
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DE   Amaryllis potyvirus strain 21221 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Amaryllis potyvirus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; unclassified Potyvirus.
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RN   [1]
RP   1-1482
RA   Jones L.A.;
RT   ;
RL   Submitted (24-AUG-2009) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology and Plant-Microbe Biology, Cornell University, NY, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1482
FT                   /organism="Amaryllis potyvirus"
FT                   /host="Amaryllis belladonna"
FT                   /strain="21221"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="16-Dec-2008"
FT                   /db_xref="taxon:282713"
FT   CDS             <1. .1386
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains Nib and coat protein"
FT                   /protein_id="ACW82750.1"
FT                   /translation="STVVDNTLMVMLAMQYSLAKLGVEYEGQESVIKYFANGDDLLIAV
FT                   HPNFCNHILDQLGSLFSQLGLIYDFSHRTKEKSELFYLSHCGVLKDGTYIPKLEKERIV
FT                   SILEWDKSSEPIQRLEAICAAIIEAWGYDDLIHEIRTFYSWVLEQAPYNELAKEGKAPY
FT                   LAELALKHLYTDEKIDASELLDYVRTFQNLFDDELPQDNCIFQAQVDAGDERAIEKAKK
FT                   ADKDVDAGTSGLTTIIQAKSFSKSMKMPQIKGKKLLDLSHLLQYKPAAEDLYNTRASQA
FT                   QLEHWYNGVMSAYEINSDEMAKVLNGLIVWCIENGTSPNLRDTWRMEFSGTFVEYPLQP
FT                   IIEFAQPSLRQIMRHFSNIAESYIVMRNQTERYMPRYAIQRGLTNYSLARFAFDFYDVT
FT                   AQTSVRAREAVAQMKAAALRGASSKLFTLDGKVGTATEDTERHTVEDVNRNMHSMLGVR
FT                   GVL"
FT   3'UTR           1387. .>1482
XX
SQ   Sequence 1482 BP; 446 A; 277 C; 363 G; 396 T; 0 other;

gq844296 Length: 1482  02-OCT-2009  Type: N  Check: 2083  ..

       1  tcgactgttg tagacaacac tttaatggtt atgctggcaa tgcagtattc
      51  attagccaaa cttggggtgg agtacgaagg tcaggaaagt gtaatcaagt
     101  acttcgctaa tggggatgat cttttgatag cggtgcatcc aaatttctgc
     151  aatcatattt tggaccaact cgggagtctc ttcagtcaac ttggattgat
     201  ttacgatttt tcacatagga caaaagaaaa atccgagttg ttttatctat
     251  cacattgtgg cgtgctgaag gatggaactt acataccaaa acttgaaaaa
     301  gagcgcattg tctccatttt agagtgggac aaaagtagtg aaccaattca
     351  aagactcgaa gctatttgtg ctgcgataat tgaagcatgg ggttatgatg
     401  atttgatcca tgaaattcga actttttatt catgggtcct tgagcaggcg
     451  ccatataatg aattggcaaa agaaggaaag gcgccatact tggcggaatt
     501  agcgttgaag catttgtaca cggacgaaaa gatagacgca tctgagttgt
     551  tggattatgt gcgtacgttt caaaacctgt tcgatgatga actgcctcag
     601  gataactgta ttttccaggc tcaagtggat gctggggatg aaagagccat
     651  tgagaaagcg aagaaagctg ataaggacgt ggatgcaggg acttcgggac
     701  tcactactat catacaggct aagtcctttt cgaaatcaat gaaaatgcca
     751  cagataaagg gaaagaagct gcttgacttg tcacaccttt tgcaatacaa
     801  gcctgcagct gaagatctgt acaacacaag ggctagtcag gcacaacttg
     851  agcactggta caatggagtt atgagtgcgt atgaaattaa ttcggatgag
     901  atggcgaagg ttttaaatgg attgatagtg tggtgcattg aaaatggaac
     951  ttcgccaaac ttgagagata cgtggcgcat ggagttttca ggaacttttg
    1001  tggaataccc actgcaaccg atcatcgaat ttgcgcaacc atcattacga
    1051  caaataatgc gccactttag taacatcgct gaatcgtata tcgtgatgcg
    1101  gaatcagaca gagcgttaca tgccgcgata tgcaattcag agaggactta
    1151  ccaactacag ccttgctcgt ttcgctttcg atttttacga cgtcaccgct
    1201  cagacgtccg taagagcgag agaggcagtt gcccagatga aagcagcagc
    1251  tttaagagga gctagttcga aacttttcac acttgatggc aaggtcggga
    1301  cagcgacaga ggacacagag cgacatacag ttgaagatgt aaaccgtaac
    1351  atgcactcga tgctcggggt gcgtggtgtt ctctagtcgg tctaatttag
    1401  catttatgag tttgatataa ataaacttat atctagcgag atttccactt
    1451  catagcgcac ttagagatgt cttacatccg aa