Sequence of DPV Groundnut bud necrosis virus

Peanut bud necrosis virus isolate Br-Nar.3 nucleocapsid (N) gene, complete cds.

ACC No: GQ844883

Dated: 2010-02-10 | Length: 831 | CRC: 100360047

                
ID   GQ844883; SV 1; linear; genomic RNA; STD; VRL; 831 BP.
XX
AC   GQ844883;
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DT   10-FEB-2010 (Rel. 103, Created)
DT   10-FEB-2010 (Rel. 103, Last updated, Version 1)
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DE   Peanut bud necrosis virus isolate Br-Nar.3 nucleocapsid (N) gene, complete
DE   cds.
XX
KW   .
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OS   Peanut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-831
RA   Ravi K.S., Kunkalikar S.R., Rajagopalan P.A., Usha B.Z.;
RT   "Natural infection of Peanut bud necrosis virus on brinjal";
RL   Unpublished.
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RN   [2]
RP   1-831
RA   Ravi K.S., Kunkalikar S.R., Rajagopalan P.A., Usha B.Z.;
RT   ;
RL   Submitted (24-AUG-2009) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology, Maharashtra Hybrid Seeds Co Ltd., Jalna - Aurangabad
RL   Road, Jalna, Maharashtra 431203, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Peanut bud necrosis virus"
FT                   /host="brinjal"
FT                   /isolate="Br-Nar.3"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /collection_date="17-Jun-2009"
FT                   /note="serogroup: WSMoV; PCR_primers=fwd_name: MhMVL-Cam-F,
FT                   rev_name: MhMVL-Cam-R"
FT                   /db_xref="taxon:40687"
FT   gene            1. .831
FT                   /gene="N"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /protein_id="ADC42752.1"
FT                   /translation="MSNVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYDANKT
FT                   LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT                   ASMVEKSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT                   LSESNPGTASSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKAGPSLEL"
XX
SQ   Sequence 831 BP; 274 A; 143 C; 177 G; 237 T; 0 other;

gq844883 Length: 831  10-FEB-2010  Type: N  Check: 1987  ..

       1  atgtctaacg ttaagcaact caccgagaag aaaatcaaag aacttctggc
      51  tggtggctct gcagatgttg aaattgaaac agaagattct actcccggat
     101  ttagctttaa agctttctat gacgctaaca aaactcttga aataactttc
     151  acaaactgtt tgaatatttt gaagtgcagg aagcagatct ttgctgcttg
     201  taaaagtggt aagtatgttt tttgtggtaa aactattgtt gctacaaata
     251  ctgacgtagg gccagatgac tggaccttca aaagaacaga agcttttatc
     301  aggaccaaaa tggctagtat ggttgaaaag agcaagaatg atgctgctaa
     351  gcaggagatg tacaataaaa taatggaatt accattagtg gcagcttatg
     401  gattaaatgt tcctgcatct ttcgatacat gtgctctaag gatgatgctc
     451  tgcattggag gtcctctgcc tctcttgtct agcatgacag gtctggcacc
     501  aattatattc cctctggctt attatcaaaa tgtaaagaaa gagaaattag
     551  gaattaagaa cttttctact tatgaacagg tttgcaaagt agccaaagtg
     601  ctttctgctt cacagattga attcaaaaat gaactagagg aaatgtttaa
     651  atcagctgta aagctattga gtgagagcaa ccctggaacg gccagctcta
     701  tctcactcaa gaaatatgat gaacaagtga aatacatgga caaagctttc
     751  agtgccagtc tctcaatgga tgattatggt gaacattcta agaagaagag
     801  ttcaaaggct ggcccttcgc tggaattgta a