Sequence of DPV Groundnut bud necrosis virus

Peanut bud necrosis virus isolate Br-Nar.25 nucleocapsid (N) gene, complete cds.

ACC No: GQ844887

Dated: 2010-02-10 | Length: 831 | CRC: 937157549

                
ID   GQ844887; SV 1; linear; genomic RNA; STD; VRL; 831 BP.
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AC   GQ844887;
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DT   10-FEB-2010 (Rel. 103, Created)
DT   10-FEB-2010 (Rel. 103, Last updated, Version 1)
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DE   Peanut bud necrosis virus isolate Br-Nar.25 nucleocapsid (N) gene, complete
DE   cds.
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KW   .
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OS   Peanut bud necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-831
RA   Ravi K.S., Kunkalikar S.R., Rajagopalan P.A., Usha B.Z.;
RT   "Natural infection of Peanut bud necrosis virus on brinjal";
RL   Unpublished.
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RN   [2]
RP   1-831
RA   Ravi K.S., Kunkalikar S.R., Rajagopalan P.A., Usha B.Z.;
RT   ;
RL   Submitted (24-AUG-2009) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology, Maharashtra Hybrid Seeds Co Ltd., Jalna - Aurangabad
RL   Road, Jalna, Maharashtra 431203, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .831
FT                   /organism="Peanut bud necrosis virus"
FT                   /host="brinjal"
FT                   /isolate="Br-Nar.25"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /collection_date="17-Jun-2009"
FT                   /note="serogroup: WSMoV; PCR_primers=fwd_name: MhMVL-Cam-F,
FT                   rev_name: MhMVL-Cam-R"
FT                   /db_xref="taxon:40687"
FT   gene            1. .831
FT                   /gene="N"
FT   CDS             1. .831
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /protein_id="ADC42756.1"
FT                   /translation="MSTVKQLTEKKIKELLAGGSADVEIETEDSTPGFSFKAFYEANKT
FT                   LEITFTNCLNILKCRKQIFAACKSGKYVFCGKTIVATNTDVGPDDWTFKRTEAFIRTKM
FT                   ASMVERSKNDAAKQEMYNKIMELPLVAAYGLNVPASFDTCALRMMLCIGGPLPLLSSMT
FT                   GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKNELEEMFKSAVKL
FT                   LSESNPGTANSISLKKYDEQVKYMDKAFSASLSMDDYGEHSKKKSSKASPSLEL"
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SQ   Sequence 831 BP; 274 A; 145 C; 175 G; 237 T; 0 other;

gq844887 Length: 831  10-FEB-2010  Type: N  Check: 3024  ..

       1  atgtctaccg ttaagcaact taccgagaag aaaatcaaag aacttttggc
      51  tggtggctct gcagatgttg aaattgaaac agaagattcc actcccggat
     101  ttagctttaa agctttctat gaagctaaca aaactcttga aataactttc
     151  acaaattgtt tgaatatttt gaagtgcagg aagcagatct ttgctgcttg
     201  caaaagtggt aagtatgttt tttgtggtaa aactattgtt gctacaaata
     251  ctgacgtagg gccagacgac tggaccttca aaaggacaga agctttcatc
     301  aggaccaaaa tggctagtat ggttgaaagg agcaagaatg atgctgctaa
     351  gcaggagatg tacaataaaa taatggaatt gccattagtg gcagcttatg
     401  gattaaatgt ccctgcatct ttcgatacat gtgctttaag gatgatgctc
     451  tgcattggag gtcctctgcc tctcttgtct agcatgacag gtctggcacc
     501  aattatattc cctctggctt attatcaaaa tgtgaagaaa gagaaattag
     551  gaattaagaa cttttctact tatgaacagg tttgcaaagt agccaaagta
     601  ctttctgctt cacagattga attcaaaaat gaactagagg aaatgtttaa
     651  atcagctgta aagctattga gtgagagcaa ccctggaaca gccaactcta
     701  tctcactcaa gaaatatgat gaacaagtca aatacatgga caaagctttc
     751  agtgccagtc tctcaatgga tgattatggt gaacattcta agaagaagag
     801  ttcaaaggct agcccttctc tggaattgta a