Sequence of DPV Potato virus Y

Potato virus Y isolate DD019_141_141 coat protein gene, partial cds.

ACC No: GQ853654

Dated: 2009-11-25 | Length: 807 | CRC: 1750724937

                
ID   GQ853654; SV 1; linear; genomic RNA; STD; VRL; 807 BP.
XX
AC   GQ853654;
XX
DT   24-NOV-2009 (Rel. 102, Created)
DT   25-NOV-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Potato virus Y isolate DD019_141_141 coat protein gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-807
RX   PUBMED; 19862472.
RA   Visser J.C., Bellstedt D.U.;
RT   "An assessment of molecular variability and recombination patterns in South
RT   African isolates of Potato virus Y";
RL   Arch. Virol. 154(12):1891-1900(2009).
XX
RN   [2]
RP   1-807
RA   Visser J.C., Bellstedt D.U.;
RT   ;
RL   Submitted (28-AUG-2009) to the EMBL/GenBank/DDBJ databases.
RL   Biochemistry, Stellenbosch University, Lab 165, Department of Biochemistry,
RL   JC Smuts Building, Van der Bijl Street, Stellenbosch, Western Cape 7600,
RL   South Africa
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FH   Key             Location/Qualifiers
FH
FT   source          1. .807
FT                   /organism="Potato virus Y"
FT                   /host="Solanum tuberosum"
FT                   /strain="N-Wi"
FT                   /isolate="DD019_141_141"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /db_xref="taxon:12216"
FT   CDS             <1. .807
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="ACZ26415.1"
FT                   /translation="MANDTIDAGGSSKKDARPEQGSIQSNPNKGKDKDVNAGTSGTHTV
FT                   PRIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDISNTRATQSQFDTWYEAVRMAYDI
FT                   GETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGNEQVEYPLKPIVENAKPTLRQIMAH
FT                   FSDVAEAYIEMRNKKEPYMPRYGLIRNLRDVGLARYAFDFYEVTSRTPVRAREAHIQMK
FT                   AAALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSMHTLLGVKNM"
XX
SQ   Sequence 807 BP; 268 A; 164 C; 206 G; 169 T; 0 other;

gq853654 Length: 807  25-NOV-2009  Type: N  Check: 588  ..

       1  atggcaaatg acacaatcga tgcaggggga agcagcaaga aagatgcaag
      51  accagagcaa ggcagcatcc agtcaaaccc gaacaaagga aaagataagg
     101  atgtgaatgc tggtacatct gggacacata ctgtgccgag aatcaaggct
     151  atcacgtcca aaatgagaat gcccaaaagc aagggagcaa ccgtgctaaa
     201  cttagaacac ttgcttgagt atgctccaca acaaattgat atttcaaata
     251  ctcgggcaac tcaatcacag tttgatacgt ggtatgaggc agtgcggatg
     301  gcatacgaca taggagaaac tgagatgcca actgtgatga atgggcttat
     351  ggtttggtgc attgaaaatg gaacctcgcc aaatgtcaac ggagtttggg
     401  ttatgatgga tgggaatgaa caagtcgagt acccgttgaa accaatcgtt
     451  gagaatgcaa aaccaaccct taggcaaatc atggcacatt tctcagatgt
     501  tgcagaagcg tatatagaaa tgcgcaacaa aaaggaacca tatatgccac
     551  gatatggttt aattcgaaat ctgcgggatg tgggtttagc gcgttatgcc
     601  tttgactttt atgaggtcac atcacgaaca ccagtgaggg ctagggaagc
     651  gcacattcaa atgaaggccg cagcattgaa atcagcccaa cctcgacttt
     701  tcgggttgga cggtggcatc agtacacaag aggagaacac agagaggcac
     751  accaccgagg atgtctctcc aagtatgcat actctacttg gagtcaagaa
     801  catgtga