Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein India virus [India:Karnal OY80A:2005] segment DNA-A, complete sequence.
ACC No: GU112008
Dated: 2012-05-20 | Length: 2741 | CRC: 2084564115
ID GU112008; SV 1; circular; genomic DNA; STD; VRL; 2741 BP.
XX
AC GU112008;
XX
DT 02-JAN-2011 (Rel. 107, Created)
DT 20-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE Bhendi yellow vein India virus [India:Karnal OY80A:2005] segment DNA-A,
DE complete sequence.
XX
KW .
XX
OS Bhendi yellow vein India virus [India:Karnal OY80A:2005]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2741
RX PUBMED; 22447131.
RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S.,
RA Krishna Reddy M.;
RT "Molecular characterization of distinct bipartite begomovirus infecting
RT bhendi (Abelmoschus esculentus L.) in India";
RL Virus Genes 44(3):522-535(2012).
XX
RN [2]
RP 1-2741
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT "Molecular genetic diversity of begomoviruses infecting okra in India";
RL Unpublished.
XX
RN [3]
RP 1-2741
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT ;
RL Submitted (26-SEP-2009) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2741
FT /organism="Bhendi yellow vein India virus [India:Karnal
FT OY80A:2005]"
FT /segment="DNA-A"
FT /host="Abelmoschus esculentus (okra)"
FT /isolate="OY80A"
FT /mol_type="genomic DNA"
FT /country="India:Karnal, Haryana"
FT /isolation_source="leaf"
FT /collected_by="M.Krishnareddy"
FT /collection_date="2005"
FT /db_xref="taxon:908039"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /db_xref="GOA:E7BNL3"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:E7BNL3"
FT /protein_id="ADO40537.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL
FT ICILRSRNYVEASCRYRHFYARVESTSASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ
FT ETQNVPDVQKSGCSKGL"
FT gene 281. .1051
FT /gene="AV1"
FT CDS 281. .1051
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:E7BNL4"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:E7BNL4"
FT /protein_id="ADO40538.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFFVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(629. .985)
FT /gene="AC5"
FT CDS complement(629. .985)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5 protein"
FT /db_xref="InterPro:IPR006892"
FT /db_xref="UniProtKB/TrEMBL:E7BNL5"
FT /protein_id="ADO40539.1"
FT /translation="MGTSHIKHQCILGVIFVFSCLLLVVNNIIVNSDKLLDQSLFLTRI
FT LTTRDGCMPFPQHLVTIPMTILHSCCTGFVVKHIEYFTKILRFVNRTTVADKEEHHRIR
FT VILGLYIFIHPYLT"
FT gene complement(1054. .1458)
FT /gene="AC3"
FT CDS complement(1054. .1458)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /db_xref="GOA:E7BNL6"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:E7BNL6"
FT /protein_id="ADO40540.1"
FT /translation="MDSPPGVPITAAYAKNGVYIWKGPNPLYFKILNHDNSPFPTNMDI
FT ITLRIHFTLPLRKALGVHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISLNL
FT VIKAVEHVLYNVINQTMYVDQYSDIKFKLY"
FT gene complement(1151. .1603)
FT /gene="AC2"
FT CDS complement(1151. .1603)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /db_xref="GOA:E7BNL7"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:E7BNL7"
FT /protein_id="ADO40541.1"
FT /translation="MQNSSFSPNRCTRVPIKVQHMEAKRHIRRRRVDLECGCSYYLFIN
FT WHNNGFSPRGTHHCSLCKEWRLYLEGSQSPLFQNPQPRQQSIPHEHGHNNTQDPFYLTP
FT TESSGSAQVFSNLPNLDDLTPSDWSFLKGIQNPSTQVSQQSRCNLT"
FT gene complement(1500. .2588)
FT /gene="AC1"
FT CDS complement(1500. .2588)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /db_xref="GOA:E7BNL8"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:E7BNL8"
FT /protein_id="ADO40542.1"
FT /translation="MPSKRFQIYSKNYFLTYPKCSLTKEEALSQIQNLQTPTNKKFIKI
FT CKELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPSRSVHFHPNIQGAKSSSDVKSYID
FT KDGDTLEWGEFQIDGRSARGGQQTANDAYATAINTGSKSEALRVIRELAPKDYVLQFHN
FT LNSNLDRIFTPPVEVFQSRYLSSSFDQVPEELEEWAAENVMDAAARPERPKSSVPEGET
FT RTGDKKWAKSLDPHTYLCGHVYLSPKAYSNKEWFKILGNVDPVYLKHFKEFMGAQRDWQ
FT SNTKYGKPGQIKGGIPTIFLCNPCPNTSYKEFLDEEKNSPLKAWALKNAEFVFLTEPLY
FT SGTNQSTAHGSEKTHQEEESRS"
FT gene complement(2132. .2434)
FT /gene="AC4"
FT CDS complement(2132. .2434)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:E7BNL9"
FT /protein_id="ADO40543.1"
FT /translation="MGNLIFTCSSSSRGNTSARISDSSTWSPQAGQYISIRTFRELNQA
FT QMSSPTSTRTETLSNGESFRSMDDLQEGDSRQPTTLTPQQLTQAVSQRLLESLGS"
XX
SQ Sequence 2741 BP; 727 A; 538 C; 637 G; 839 T; 0 other;
gu112008 Length: 2741 20-MAY-2012 Type: N Check: 1963 ..
1 accggatggc cgcgcgattt tttaaagtgg tgggtccaga acgcacgacg
51 atgcagactc aaagcttaga taacgctcct tcggctataa gtacttgcgc
101 actaagtttc aattcaaaaa atgtgggatc cactgttaaa cgaattccct
151 gatacggtgc acgggtttcg gtgtatgctt tctgtcaaat atttgcaact
201 tttgtcgcag gattattcac cggataccct tggttacgag ttaatacggg
251 atttaatctg tattttacgc tctcgtaatt atgtcgaagc gagctgcaga
301 tatcgtcatt tctacgcccg cgtcgaaagt acgtcggcgt ctgaacttcg
351 gcagcccata caccagccgt gctgctgccc ccattgtccg cgtcacaaaa
401 caacaggcat ggacaaacag gcctatgaac aggaaaccca gaatgtaccg
451 gatgtacaga agtccggatg ttccaagggg ttgtgaaggc ccatgtaagg
501 tacaatcgtt tgagtccaga catgatgttg tccatattgg taaggtaatg
551 tgtatttctg atgttacgcg tggagtcggt ttgacccatc gtattggtaa
601 acgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggatg
651 aaaatataaa gaccaagaat cacacgaatt ctgtgatgtt cttctttgtc
701 cgcgaccgtc gtcctgttga caaacctcag gattttggtg aagtattcaa
751 tatgtttgac aacgaaccca gtacagcaac tgtgaagaat agtcataggg
801 atcgttacca ggtgttgagg aaatggcatg caaccgtcac gggtggtcaa
851 tatgcgagta aggaacaggc tttggtcaag aagtttgtca gagttaacaa
901 ttatgttgtt tacaaccagc aggaggcagg aaaatacgaa aatcacaccg
951 agaatgcatt gatgctttat atggcttgta cccatgctag taacccagtt
1001 tatgctacgc ttaagattcg gatatatttt tatgactctg taacgaattg
1051 aaattaataa agtttgaatt ttatatctga atattggtct acatacattg
1101 tttgattaat tacattgtac aatacatgtt caacggcttt aataactaaa
1151 ttaagtgaga ttacaccgag attgttgaga tacttgagta cttgggtttt
1201 gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagattc
1251 ggaaggttag aaaacacttg tgcactccca gagctttccg taggggtaag
1301 gtaaaatgga tcctgagtgt tattatgtcc atgttcgtgg ggaatggact
1351 gttgtcgtgg ttgaggattt tgaaatagag gggattggga cccttccaga
1401 tatagacgcc attctttgca taagctgcag tgatgggtac ccctggggga
1451 gaatccattg ttgtgccagt tgataaagag ataataagaa cacccgcatt
1501 caagatctac tctcctcctc ctgatgtgtc ttttcgcttc catgtgctgt
1551 actttgattg gtacccgagt acaacggttc ggtgagaaag acgaattctg
1601 cattttttaa agcccacgct ttcaaaggtg agttcttttc ctcgtccaag
1651 aattctttat agcttgtgtt ggggcatgga ttgcagagga agattgttgg
1701 aatcccgcct ttaatttgac ctggcttccc gtacttggtg tttgattgcc
1751 agtccctttg ggcccccatg aattctttaa agtgtttcag ataaacaggg
1801 tcaacatttc ctagaatttt gaaccattct ttgttggaat acgctttagg
1851 gctaagatat acgtgaccac ataaataggt atgtgggtct aaagactttg
1901 cccatttttt atcgccggta cgagtctcac cctctggaac tgaactctta
1951 ggtctttctg gccgcgcagc ggcgtccatg acgttttctg ccgcccactc
2001 ttcaagttct tctggaactt gatcaaaaga ggaagaaaga tacctagact
2051 gaaaaacctc aactggaggt gtaaaaatcc tatctaaatt ggaatttaaa
2101 ttatgaaatt gtaatacgta atccttaggt gctaactccc taatgactct
2151 aagagcctct gacttactgc ctgtgttaat tgctgtggcg taagcgtcgt
2201 tggctgtctg ctgtccccct cttgcagatc gtccatcgat ctgaaactct
2251 ccccattcga gagtgtctcc gtccttgtcg atgtaggact tgacatctga
2301 gcttgattta gctccctgaa tgttcggatg gaaatgtact gacctgcttg
2351 gggagaccag gtcgaagaat cgctgattct ggcacttgta tttcccctcg
2401 aactggatga gcacgtgaag atgaggttcc ccattctcgt gaagctcttt
2451 gcagattttg atgaattttt tatttgttgg agtttgtagg ttttgtattt
2501 gggaaagtgc ttcttcttta gtaagagagc acttgggata agtgaggaaa
2551 taatttttgg aatatatttg aaagcgttta gaaggcatgt tgactaaaat
2601 tgagtaccga ttgactcgct ctggcaactc tctctgttat atcggtaccc
2651 aatatatagt gagtaccaaa tggcatatgt gtaattttgt aatgaaattc
2701 aaaatcctca cgctccaaaa agcggccatc cgtataatat t