Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein mosaic virus [India:Phalaghat:OY014:2005] segment DNA-A, complete sequence.
ACC No: GU112055
Dated: 2012-05-20 | Length: 2744 | CRC: -510566552
ID GU112055; SV 1; circular; genomic DNA; STD; VRL; 2744 BP.
XX
AC GU112055;
XX
DT 02-JAN-2011 (Rel. 107, Created)
DT 20-MAY-2012 (Rel. 112, Last updated, Version 2)
XX
DE Bhendi yellow vein mosaic virus [India:Phalaghat:OY014:2005] segment DNA-A,
DE complete sequence.
XX
KW .
XX
OS Bhendi yellow vein mosaic virus [India:Phalaghat:OY014:2005]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2744
RX PUBMED; 22447131.
RA Venkataravanappa V., Lakshminarayana Reddy C.N., Jalali S.,
RA Krishna Reddy M.;
RT "Molecular characterization of distinct bipartite begomovirus infecting
RT bhendi (Abelmoschus esculentus L.) in India";
RL Virus Genes 44(3):522-535(2012).
XX
RN [2]
RP 1-2744
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT "Molecular genetic diversity of begomoviruses infecting okra in India";
RL Unpublished.
XX
RN [3]
RP 1-2744
RA Venkataravanappa V., Lakshiminarayanareddy C.N., Devaraju, Swaranalatha P.,
RA Jalali S., Krishnareddy M.;
RT ;
RL Submitted (30-SEP-2009) to the INSDC.
RL Division of Plant Pathology, Indian Institute of Horticultural Research,
RL Hessaraghatta Lake PO, Bangalore, Karnataka 560089, India
XX
FH Key Location/Qualifiers
FH
FT source 1. .2744
FT /organism="Bhendi yellow vein mosaic virus
FT [India:Phalaghat:OY014:2005]"
FT /segment="DNA-A"
FT /host="Abelmoschus esculentus (okra)"
FT /isolate="OY014"
FT /mol_type="genomic DNA"
FT /country="India:Phalaghat, Kerala"
FT /isolation_source="leaf"
FT /collected_by="V.Venkataravanappa"
FT /collection_date="2005"
FT /db_xref="taxon:908102"
FT gene 121. .486
FT /gene="AV2"
FT CDS 121. .486
FT /codon_start=1
FT /gene="AV2"
FT /product="precoat protein"
FT /db_xref="GOA:E7BPI9"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:E7BPI9"
FT /protein_id="ADO40863.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDL
FT IRILRSRNYVEASCRYRHFYAHVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ
FT ETQNVPDVQKSGCSKGM"
FT gene 281. .1051
FT /gene="AV1"
FT CDS 281. .1051
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:E7BPJ0"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:E7BPJ0"
FT /protein_id="ADO40864.1"
FT /translation="MSKRAADIVISTPTSKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIWMDENIRTKDHTNSVMFFLGRDRRPADKPQDFGEVFNMFDNEP
FT STATVKNMHRDRYQVLRKWHATVTGGQYAERELALVRKFVRVNNYVVYNQQEAGKYETH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(629. .985)
FT /gene="AC5"
FT CDS complement(629. .985)
FT /codon_start=1
FT /gene="AC5"
FT /product="AC5 protein"
FT /db_xref="InterPro:IPR006892"
FT /db_xref="UniProtKB/TrEMBL:E7BPJ1"
FT /protein_id="ADO40865.1"
FT /translation="MGTSHIKHQCILGVSLVFPCLLLVVNNIIVNPDKFPNQRQFPLCI
FT LTTSNGCMPFPQNLITIPMHVLHSRRTGLIIKHIKYFTKILWFICRSSITTKEKHHRIR
FT MVLRPDVLVHPYLT"
FT gene complement(1054. .1458)
FT /gene="AC3"
FT CDS complement(1054. .1458)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /db_xref="GOA:E7BPJ2"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:E7BPJ2"
FT /protein_id="ADO40866.1"
FT /translation="MDSRTGERITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI
FT ITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPPTGLFLRVFKNQVLKYLNNLGVISLNL
FT VIKAVEHVLYNVINQTMYVDQYSDIKFKLY"
FT gene complement(1151. .1603)
FT /gene="AC2"
FT CDS complement(1151. .1603)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /db_xref="GOA:E7BPJ3"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:E7BPJ3"
FT /protein_id="ADO40867.1"
FT /translation="MQHSSFSPNRCTRVPIKVQHREAKRRIRRRRVDLECGCSYYLSIN
FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLQP
FT TESSGNSQVFSNLPNLDDLTPSDWSFLKGIQKPSTQVSQQSRCNLT"
FT gene complement(1500. .2591)
FT /gene="AC1"
FT CDS complement(1500. .2591)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /db_xref="GOA:E7BPJ4"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="InterPro:IPR022690"
FT /db_xref="InterPro:IPR022692"
FT /db_xref="UniProtKB/TrEMBL:E7BPJ4"
FT /protein_id="ADO40868.1"
FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQFLNLQTPVNKKFIR
FT ICRELHEDGNPHLHVLIQFEGKFQCRNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIRELAPKDYVLQFH
FT NLNANLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMDAAARPLRPLSLVLEGD
FT SRTGKTRCGWSLGPHNYLCGHLDLSPKVYSNDAWFNIIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTEPL
FT YSGTNQSTAQGSEETHQEEESRS"
FT gene complement(2132. .2434)
FT /gene="AC4"
FT CDS complement(2132. .2434)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:E7BPJ5"
FT /protein_id="ADO40869.1"
FT /translation="MGILTCMFSSSSKESSSAGTIDSSTSPPQLGQHISIQTFRELNQA
FT QMSSPTSTRTETPSNGESFRSMDDLQEGDSKQPTTLTPQHLTQAVSQRLLESLGS"
XX
SQ Sequence 2744 BP; 724 A; 539 C; 652 G; 829 T; 0 other;
gu112055 Length: 2744 20-MAY-2012 Type: N Check: 3650 ..
1 accggatggc cgcgcgattt ttttaagtgg tgggtccaga acgcacgact
51 atgcagactc aaagcttaga taacgctcct tcggctataa gtacgtgcgc
101 actaagtttc aattcaaaaa atgtgggatc cactattaaa cgaatttccg
151 gatacggttc acgggtttcg ttgtatgcta tctgtaaaat atttgcaact
201 tttgtcgcag gattattctc cagatacgct tgggtacgag ttaatacggg
251 atttaattcg tattttacgc tcccgtaatt atgtcgaagc gagctgccga
301 tatcgtcatt tctacgccca cgtcgaaagt acgccggcgt ctgaacttcg
351 gcagcccata caccagccgt gctgctgccc ccattgtccg cgtcacaaaa
401 caacaggcat ggacaaacag gcctatgaac aggaaaccca gaatgtaccg
451 gatgtacaga agtccggatg ttccaagggg atgtgagggt ccctgtaagg
501 tacagtcgtt tgaatctcga cacgatgtcg ttcatattgg taaggtaatg
551 tgtatttcgg atgttacgcg tggagtcggt ttgacccatc ggataggtaa
601 gcgtttttgt gtcaagtcag tttatgtttt aggtaagata tggatggacg
651 agaacatcag gacgaaggac catacgaatt cggtgatgtt tttccttggt
701 cgtgatcgac gaccggcaga taaaccacaa gattttggtg aagtatttaa
751 tatgtttgat aatgagccca gtacggcgac tgtgaagaac atgcataggg
801 atcgttatca ggttttgagg aaatggcatg caaccgttac tggtggtcaa
851 tatgcagaga gggaactggc gttggttagg aaatttgtca gggttaacaa
901 ttatgttgtt tacaaccagc aggaggcagg gaaatacgag actcacaccg
951 agaatgcatt gatgctttat atggcttgta cccatgctag taacccagtg
1001 tatgctacgc ttaagattcg gatttatttt tatgactctg tgacgaacta
1051 atattaataa agtttgaatt ttatatctga atattggtct acatacattg
1101 tttgattaat tacattgtac aatacatgtt caacggcttt aataactaaa
1151 ttaagtgaga ttacacctag attgttgaga tacttgagta cttggttttt
1201 gaataccctt aagaaaagac cagtcggagg gtgtaaggtc gtccagattc
1251 ggaaggttag aaaacacttg tgaattccca gagctttccg taggttgtag
1301 ttgaaatgga tcctgagtgt tattatgtcc atgttcgtcg tgaatggacg
1351 gttgtcgtgg ttgaggatct tgaaatagag gggatttgga accttccaga
1401 tatagacgcc attctttgct tgagctgcag tgatgcgttc ccctgtgcga
1451 gaatccatgg ttgtggcagt tgatagagag ataataagaa cacccgcatt
1501 caagatctac tctcctcctc ctgatgcgtc tcttcgcttc cctgtgctgt
1551 actttgattg gtacccgagt acaacggttc ggtgagaaag acgaatgctg
1601 cattttttaa agcccacgct ttcaaagctg agttcttttc ctcgtccaag
1651 aactctttat agcttgcgtt ggggcctgga ttgcagagga agattgttgg
1701 aatgccgcct ttaatttgaa ctggcttccc gtacttggtg tttgattgcc
1751 agtccctttg ggcccccatg aattctttaa agtgtttcag ataatgcggg
1801 tcaacatcat ctataatgtt gaaccacgca tcgtttgaat acactttagg
1851 gcttagatct aggtgaccac ataaatagtt atgtgggcct aatgaccagc
1901 cacatcgtgt cttcccggta cgactgtctc cctctaatac taaactcaaa
1951 ggtctcagag gccgcgcagc ggcgtccatg acgttttccg atacccattc
2001 ctctagttct tctggaactt gatcgaaaga agaagataaa aaaggagaaa
2051 cataaacctc caagggaggt gtaaaaatcc tatctaaatt ggcatttaaa
2101 ttatgaaatt gtaatacata atccttaggt gctaactccc taatgactct
2151 aagagcctct gacttactgc ctgcgttaag tgctgcggcg taagcgtcgt
2201 tggctgtttg ctgtccccct cttgcagatc gtccatcgat ctgaaactct
2251 ccccattcga gggtgtctcc gtccttgtcg atgtaggact tgacatctga
2301 gcttgattta gctccctgaa tgtttggatg gaaatgtgct gacctagttg
2351 gggaggtgag gtcgaagaat ctattgttcc tgcactggaa ctttccttcg
2401 aactggatga gaacatgcaa gtgaggattc ccatcttcat gaagttctct
2451 gcagattcta atgaattttt tgtttactgg ggtttggaga tttaagaatt
2501 gggaaagtgc ttcttcttta gtcagggagc acttgggata agtgagaaaa
2551 taatttttgg catttatttt aaaccgattg ggtgctgcca tgttgactta
2601 gtcaatcggt gtctctcaac tctctctatg tatcggtgta ttggagtcct
2651 atatatatgg agactctaat ggcataaatg taaataaaag aactttaatt
2701 tgaaattcaa aggaaaaggc taaagcggcc atccgtctaa tatt