Sequence of DPV Potato virus X
Potato virus X isolate 139-PVX coat protein (cp) gene, complete cds.
ACC No: GU144359
Dated: 2010-09-07 | Length: 914 | CRC: 391504983
ID GU144359; SV 1; linear; genomic RNA; STD; VRL; 914 BP. XX AC GU144359; XX DT 23-DEC-2009 (Rel. 103, Created) DT 07-SEP-2010 (Rel. 106, Last updated, Version 2) XX DE Potato virus X isolate 139-PVX coat protein (cp) gene, complete cds. XX KW . XX OS Potato virus X OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales; OC Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-914 RA Mortensen R.J., Shen X., Reid A., Mulholland V.; RT "Characterization of Viruses Infecting Potato Plants from a Single Location RT in Shetland, an Isolated Scottish Archipelago"; RL J. Phytopathol. 158(9):633-640(2010). XX RN [2] RP 1-914 RA Mortensen R.J., Shen X., Reid A., Mulholland V.; RT ; RL Submitted (29-OCT-2009) to the EMBL/GenBank/DDBJ databases. RL Diagnostics and Molecular Biology Section, SASA (Science and Advice for RL Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK XX FH Key Location/Qualifiers FH FT source 1. .914 FT /organism="Potato virus X" FT /host="potato, Red Foula cultivar" FT /isolate="139-PVX" FT /mol_type="genomic RNA" FT /country="United Kingdom:Shetland" FT /collection_date="May-2008" FT /db_xref="taxon:12183" FT gene 143. .856 FT /gene="cp" FT CDS 143. .856 FT /codon_start=1 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:D2JYQ7" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:D2JYQ7" FT /protein_id="ADA57759.1" FT /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR FT AIVASNAVATNEDLNKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY FT SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD FT FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI FT TGTTTAEAVVTLPPP" XX SQ Sequence 914 BP; 259 A; 251 C; 205 G; 199 T; 0 other; gu144359 Length: 914 07-SEP-2010 Type: N Check: 5302 .. 1 aggactgaac cttgtgtcat caagattact ggagaatcaa tcacagtgtt 51 ggcttgcaaa ttagatgcag aaaccatcag agccattgcc gatctcaagc 101 cactctccgt tgaacggtta agtttccatt gatactcgaa agatgtcagc 151 accagctagc acaacacagg ccacagggtc aactacctca actaccacaa 201 aaactgcagg cgcaactcct gccacagctt caggactgtt caccatcccg 251 gatggggatt tctttagtac agcccgtgct atagtagcca gcaatgccgt 301 tgcaacaaat gaggacctca acaagattga ggctatctgg aaggacatga 351 aggtgcccac agacactatg gcacaggctg cttgggactt agtcagacac 401 tgcgccgatg tgggctcatc tgctcaaaca gaaatgatag acacaggtcc 451 ctattccaac ggcatcagca gagccagact ggcagcagca attaaagagg 501 tgtgcacact taggcaattt tgcatgaagt atgccccagt ggtatggaac 551 tggatgctga ctaacaacag tccacctgct aactggcaag cacaaggttt 601 caagcctgag cacaaattcg ctgcattcga cttcttcaat ggagtcacca 651 acccagctgc catcatgccc aaagaggggc tcatccggcc accgtccgaa 701 gctgaaatga atgctgccca aactgctgcc tttgtgaaga tcacgaaggc 751 cagggcacaa tccaacgact ttgccagcct agatgcagct gttactcgag 801 gtcgtatcac tggaacaaca accgctgagg ctgttgtcac tctcccacca 851 ccataactac gtctacataa ccgacgccta ccccagtttc atagtatttt 901 ctggtttgat tgta