Sequence of DPV Potato virus X

Potato virus X isolate 139-PVX coat protein (cp) gene, complete cds.

ACC No: GU144359

Dated: 2010-09-07 | Length: 914 | CRC: 391504983

                
ID   GU144359; SV 1; linear; genomic RNA; STD; VRL; 914 BP.
XX
AC   GU144359;
XX
DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Potato virus X isolate 139-PVX coat protein (cp) gene, complete cds.
XX
KW   .
XX
OS   Potato virus X
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RP   1-914
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   "Characterization of Viruses Infecting Potato Plants from a Single Location
RT   in Shetland, an Isolated Scottish Archipelago";
RL   J. Phytopathol. 158(9):633-640(2010).
XX
RN   [2]
RP   1-914
RA   Mortensen R.J., Shen X., Reid A., Mulholland V.;
RT   ;
RL   Submitted (29-OCT-2009) to the EMBL/GenBank/DDBJ databases.
RL   Diagnostics and Molecular Biology Section, SASA (Science and Advice for
RL   Scottish Agriculture), Roddinglaw Road, Edinburgh, Midlothian EH12 9FJ, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .914
FT                   /organism="Potato virus X"
FT                   /host="potato, Red Foula cultivar"
FT                   /isolate="139-PVX"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Shetland"
FT                   /collection_date="May-2008"
FT                   /db_xref="taxon:12183"
FT   gene            143. .856
FT                   /gene="cp"
FT   CDS             143. .856
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:D2JYQ7"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:D2JYQ7"
FT                   /protein_id="ADA57759.1"
FT                   /translation="MSAPASTTQATGSTTSTTTKTAGATPATASGLFTIPDGDFFSTAR
FT                   AIVASNAVATNEDLNKIEAIWKDMKVPTDTMAQAAWDLVRHCADVGSSAQTEMIDTGPY
FT                   SNGISRARLAAAIKEVCTLRQFCMKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFD
FT                   FFNGVTNPAAIMPKEGLIRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRI
FT                   TGTTTAEAVVTLPPP"
XX
SQ   Sequence 914 BP; 259 A; 251 C; 205 G; 199 T; 0 other;

gu144359 Length: 914  07-SEP-2010  Type: N  Check: 5302  ..

       1  aggactgaac cttgtgtcat caagattact ggagaatcaa tcacagtgtt
      51  ggcttgcaaa ttagatgcag aaaccatcag agccattgcc gatctcaagc
     101  cactctccgt tgaacggtta agtttccatt gatactcgaa agatgtcagc
     151  accagctagc acaacacagg ccacagggtc aactacctca actaccacaa
     201  aaactgcagg cgcaactcct gccacagctt caggactgtt caccatcccg
     251  gatggggatt tctttagtac agcccgtgct atagtagcca gcaatgccgt
     301  tgcaacaaat gaggacctca acaagattga ggctatctgg aaggacatga
     351  aggtgcccac agacactatg gcacaggctg cttgggactt agtcagacac
     401  tgcgccgatg tgggctcatc tgctcaaaca gaaatgatag acacaggtcc
     451  ctattccaac ggcatcagca gagccagact ggcagcagca attaaagagg
     501  tgtgcacact taggcaattt tgcatgaagt atgccccagt ggtatggaac
     551  tggatgctga ctaacaacag tccacctgct aactggcaag cacaaggttt
     601  caagcctgag cacaaattcg ctgcattcga cttcttcaat ggagtcacca
     651  acccagctgc catcatgccc aaagaggggc tcatccggcc accgtccgaa
     701  gctgaaatga atgctgccca aactgctgcc tttgtgaaga tcacgaaggc
     751  cagggcacaa tccaacgact ttgccagcct agatgcagct gttactcgag
     801  gtcgtatcac tggaacaaca accgctgagg ctgttgtcac tctcccacca
     851  ccataactac gtctacataa ccgacgccta ccccagtttc atagtatttt
     901  ctggtttgat tgta