Sequence of DPV Tomato spotted wilt virus

Tomato spotted wilt virus strain TwPep1 nucleocapsid protein (N) gene, complete cds.

ACC No: GU222651

Dated: 2010-09-07 | Length: 777 | CRC: 865231543

                
ID   GU222651; SV 1; linear; genomic RNA; STD; VRL; 777 BP.
XX
AC   GU222651;
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DT   23-DEC-2009 (Rel. 103, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
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DE   Tomato spotted wilt virus strain TwPep1 nucleocapsid protein (N) gene,
DE   complete cds.
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KW   .
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OS   Tomato spotted wilt virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-777
RA   Zheng Y.-X., Huang C.-H., Cheng Y.-H., Kuo F.-Y., Jan F.-J.;
RT   "First Report of Tomato spotted wilt virus in Sweet Pepper in Taiwan";
RL   Plant Dis. 94(7):920-920(2010).
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RN   [2]
RP   1-777
RA   Jan F.-J.;
RT   ;
RL   Submitted (20-NOV-2009) to the EMBL/GenBank/DDBJ databases.
RL   Department of Plant Pathology, National Chung Hsing University, 250
RL   Kuo-Kuang Road, Taichung, Taiwan 402, Taiwan
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FH   Key             Location/Qualifiers
FH
FT   source          1. .777
FT                   /organism="Tomato spotted wilt virus"
FT                   /host="Capsicum annuum L."
FT                   /strain="TwPep1"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /collection_date="Jul-2009"
FT                   /db_xref="taxon:11613"
FT   gene            1. .777
FT                   /gene="N"
FT   CDS             1. .777
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:D2KKI7"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:D2KKI7"
FT                   /protein_id="ADA67880.1"
FT                   /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI
FT                   KKMSTISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLTELA"
XX
SQ   Sequence 777 BP; 255 A; 131 C; 174 G; 217 T; 0 other;

gu222651 Length: 777  07-SEP-2010  Type: N  Check: 1371  ..

       1  atgtctaagg ttaagctcac taaggaaagc attgttgctt tgttgacaca
      51  aggcaaagac cttgagtttg aggaagatca gaatttggta gcattcaact
     101  tcaagacttt ttgtctggaa aaccttgacc agatcaaaaa gatgagcact
     151  atttcatgtc tgacattcct gaagaatcgt cagagcataa tgaaggttat
     201  taagcaaagt gattttactt ttggtaaaat taccataaag aaaacttcag
     251  acaggattgg agccactgac atgaccttca gaaggcttga tagcttgatc
     301  agggtcaggc ttgttgagga aactgggaat tctgagaatc tcaatactat
     351  caaatctaag attgcttccc accctttgat tcaagcttat ggattacctc
     401  ttgatgatgc aaagtctgtg aggcttgcca taatgctggg aggtagctta
     451  cctcttattg cttcagttga tagctttgag atgatcagtg ttgtcttggc
     501  tatatatcag gatgcaaaat acaaggatct cgggatcgac ccaaagaagt
     551  atgacaccag ggaagcctta ggaaaagttt gcactgtgct gaaaagcaaa
     601  gcatttgaaa tgaatgaaga tcaggtgaag aaggggaaag agtatgctgc
     651  tatacttagc tccagcaatc ctaatgctaa aggaagtatt gctatggaac
     701  attacagtga aactcttaac aagttctatg aaatgtttgg ggttaaaaaa
     751  caggcaaaac tcacagaact tgcttaa