Sequence of DPV Barley yellow dwarf virus-PAV

Barley yellow dwarf virus -Pav isolate SWB coat protein (CP) RNA, complete cds.

ACC No: GU247980

Dated: 2010-01-07 | Length: 576 | CRC: 159949696

                
ID   GU247980; SV 1; linear; genomic RNA; STD; VRL; 576 BP.
XX
AC   GU247980;
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DT   07-JAN-2010 (Rel. 103, Created)
DT   07-JAN-2010 (Rel. 103, Last updated, Version 1)
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DE   Barley yellow dwarf virus -Pav isolate SWB coat protein (CP) RNA, complete
DE   cds.
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KW   .
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OS   Barley yellow dwarf virus-PAV
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
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RN   [1]
RP   1-576
RA   Siddiqui N.N., Mansoor S., Azhar A., Hafeez M.S.;
RT   ;
RL   Submitted (25-NOV-2009) to the EMBL/GenBank/DDBJ databases.
RL   Biotechnology, Institute of Biotechnology and Genetic Engineering (KIBGE),
RL   University of Karachi, Karachi, Karachi 75300, Pakistan
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FH   Key             Location/Qualifiers
FH
FT   source          1. .576
FT                   /organism="Barley yellow dwarf virus-PAV"
FT                   /host="wheat"
FT                   /isolate="SWB"
FT                   /serotype="Pav"
FT                   /mol_type="genomic RNA"
FT                   /country="Pakistan"
FT                   /collection_date="Mar-2008"
FT                   /identified_by="Nadir Naveed Siddiqui"
FT                   /PCR_primers="fwd_seq: acctagacgcgcaaatcaaa, rev_seq:
FT                   tgttgaggagtctacctatttg"
FT                   /db_xref="taxon:12040"
FT   CDS             <1. .>576
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="ADA84133.1"
FT                   /translation="PRRANQNGTRRRRRRTVRPVVVVQPNRAGPRRRNGRRKGRGGANP
FT                   IFRPTGGTEVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKITSIRVEFK
FT                   SHASATTAGAIFIELDTACKQSALASYINSFTISKTASKVFRAEAINGKEFQESTIDQF
FT                   WMLYKANGTTTDTAGQFIITMSVSLMTAK"
XX
SQ   Sequence 576 BP; 172 A; 153 C; 137 G; 114 T; 0 other;

gu247980 Length: 576  07-JAN-2010  Type: N  Check: 1038  ..

       1  cctagacgcg caaatcaaaa tggcacaaga aggaggcgcc gtagaacagt
      51  tcggccagtg gttgtggtcc aacccaatcg agcaggaccc agacgacgaa
     101  atggtcgacg caagggaaga ggaggggcaa atcctatatt tagaccaaca
     151  ggcgggactg aggtattcgt attctcagtc gacaacctta aagccaactc
     201  ttccggggca atcaaattcg gccccagtct atcgcaatgc ccagcgcttt
     251  cagacggaat acttaagtcc taccaccgtt acaagatcac aagtatccgt
     301  gttgagttta agtcacacgc gtccgcaact acggccggcg ctatctttat
     351  tgaactcgac accgcgtgca aacaatcagc cctggctagc tacattaatt
     401  ccttcacaat cagcaagacc gcctcaaagg tcttcagagc cgaagcgatt
     451  aacgggaagg aattccagga atcaacgata gaccagtttt ggatgctcta
     501  caaggccaat ggaaccacca ctgacacggc aggacaattc attatcacga
     551  tgagtgtcag tttgatgacg gccaaa