Sequence of DPV Potato virus S

Potato virus S from India coat protein (CP) gene, complete cds.

ACC No: GU256061

Dated: 2010-01-14 | Length: 885 | CRC: 1052965754

                
ID   GU256061; SV 1; linear; genomic RNA; STD; VRL; 885 BP.
XX
AC   GU256061;
XX
DT   14-JAN-2010 (Rel. 103, Created)
DT   14-JAN-2010 (Rel. 103, Last updated, Version 1)
XX
DE   Potato virus S from India coat protein (CP) gene, complete cds.
XX
KW   .
XX
OS   Potato virus S
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Betaflexiviridae; Carlavirus.
XX
RN   [1]
RP   1-885
RA   Mandal S., Ghosh R., Jain R.K.;
RT   "Molecular characterization and computational analysis of coat protein gene
RT   of different potato viruses from India";
RL   Unpublished.
XX
RN   [2]
RP   1-885
RA   Mandal S., Ghosh R., Jain R.K.;
RT   ;
RL   Submitted (01-DEC-2009) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Indian Agricultural Research Institute, Pusa, New Delhi,
RL   Delhi 110012, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .885
FT                   /organism="Potato virus S"
FT                   /host="potato"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Himachal Pradesh"
FT                   /db_xref="taxon:12169"
FT   gene            1. .885
FT                   /gene="CP"
FT   CDS             1. .885
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="ADB24613.1"
FT                   /translation="MPPKPDPTSSGETPQAPPLVPPPRNVEEHRVGPNQGHGQNEEAML
FT                   EQRLIRLIELMASKRHNSTLSNISFEIGRPSLEPTPEMRRNPENPYSRFSIDELFKMEI
FT                   QSVSNNMANTEQMAQITADIAGLGVPTEHVAGVILKVVIMCASVSSSVYLDPAGTVEFP
FT                   TGAVPLDSIVAIMKNRAGLRKVCRLYAPVVWNYMLVQNRPPSDWQAMGFQWNARFAAFD
FT                   TFDYVTNGAAIQPVEGLIRRPTPEETIAHNAHKSMAIDKSNRNERLANTNVEYTGGMLG
FT                   AEIVRNHRNAINQ"
XX
SQ   Sequence 885 BP; 240 A; 215 C; 244 G; 186 T; 0 other;

gu256061 Length: 885  14-JAN-2010  Type: N  Check: 9986  ..

       1  atgccgccca aaccggatcc gacaagctca ggagagacac cacaagcacc
      51  gccgcttgtg ccgccgcccc ggaatgtaga ggagcataga gttggcccaa
     101  atcaagggca cgggcagaat gaagaggcta tgctggagca gaggctcatc
     151  aggttgattg aactcatggc ctcaaaaagg cacaattcaa cattgagcaa
     201  catctctttt gagataggta ggccctcact tgagccgacc cctgaaatgc
     251  ggaggaatcc ggagaatcca tactctcggt tttcgatcga tgagctgttt
     301  aaaatggaaa tccagtctgt gtccaacaac atggcaaaca ccgagcaaat
     351  ggcgcaaatc actgctgaca tcgctggact tggggtcccc actgaacacg
     401  ttgctggggt catactgaaa gtggtgatca tgtgtgcaag cgtgagtagc
     451  tctgtttatc tagatcccgc agggaccgtg gagttcccaa ctggcgcagt
     501  gcccttggac tcgatcgttg caatcatgaa gaatcgcgcg ggattgagaa
     551  aagtgtgcag gctgtatgct ccagtcgtgt ggaattacat gttagttcag
     601  aataggccac cctcggattg gcaggccatg ggatttcaat ggaatgcacg
     651  cttcgccgca tttgacacat tcgattatgt gactaatggg gctgcaatac
     701  agccggtcga ggggctcata cgcaggccca cgcctgagga gacaatagct
     751  cacaatgccc acaagagtat ggcaattgac aagtcgaaca gaaatgagcg
     801  attggccaac actaatgttg agtacactgg agggatgctt ggcgctgaga
     851  ttgtgcgcaa tcaccgtaat gcgatcaacc aatga