Sequence of DPV Potato virus S

Potato virus S strain WAPC coat protein gene, complete cds.

ACC No: GU319949

Dated: 2010-07-13 | Length: 885 | CRC: 531258694

                
ID   GU319949; SV 1; linear; genomic RNA; STD; VRL; 885 BP.
XX
AC   GU319949;
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DT   13-JUL-2010 (Rel. 105, Created)
DT   13-JUL-2010 (Rel. 105, Last updated, Version 1)
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DE   Potato virus S strain WAPC coat protein gene, complete cds.
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KW   .
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OS   Potato virus S
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Betaflexiviridae; Carlavirus.
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RN   [1]
RP   1-885
RX   PUBMED; 20467765.
RA   Cox B.A., Jones R.A.;
RT   "Genetic variability in the coat protein gene of Potato virus S isolates
RT   and distinguishing its biologically distinct strains";
RL   Arch. Virol. 155(7):1163-1169(2010).
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RN   [2]
RP   1-885
RA   Cox B.A., Jones R.A.;
RT   ;
RL   Submitted (30-NOV-2009) to the EMBL/GenBank/DDBJ databases.
RL   Plant Virology, Department of Agriculture and Food Western Australia, 3
RL   Baron-Hay Court, South Perth, WA 6151, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .885
FT                   /organism="Potato virus S"
FT                   /host="Solanum tuberosum cv. Purple Congo"
FT                   /strain="WAPC"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collection_date="2007"
FT                   /note="ordinary strain"
FT                   /db_xref="taxon:12169"
FT   CDS             1. .885
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ADJ93812.1"
FT                   /translation="MPPKPDPTSSGETPQAIPLAPPPRYVEEHKVGPSQGPGQNEEAML
FT                   EQRLIRLIELMASKRHNSTLSNISFEIGRPSLEPTPEMRRNPENPYSRFSIDELFKMEI
FT                   RSVSNNMANTEQMAQITADIAGLGVPTEHVAGVILKVVIMCASVSSSVYLDPAGTVEFP
FT                   TGAVPLDSIIAIMKNRAGLRKVCRLYAPVVWNYMLVQNRPPSDWQAMGFQWNARFAAFD
FT                   TFDYVTNGAAIQPVEGLIRRPTPEETIAHNAHKSMAIDKSNRNERLANTNVEYTGGMLG
FT                   AEIVRNHRNAINQ"
XX
SQ   Sequence 885 BP; 240 A; 218 C; 244 G; 183 T; 0 other;

gu319949 Length: 885  13-JUL-2010  Type: N  Check: 9402  ..

       1  atgccgccca aaccggatcc gacgagctca ggagagacac cacaagcaat
      51  accgcttgcg ccgccgcccc ggtacgtaga ggagcataaa gttggcccaa
     101  gtcaagggcc cgggcagaat gaagaggcta tgctggagca gaggctcatc
     151  aggttgattg aactcatggc ctcgaagagg cacaattcaa cattgagcaa
     201  catctctttt gagataggta ggccctcgct tgagccgacc cctgaaatgc
     251  ggaggaatcc ggagaatcca tactcgcggt tttcaatcga tgagctgttc
     301  aagatggaaa tccggtctgt gtccaacaac atggcgaaca ccgagcaaat
     351  ggcacaaatc actgctgaca tcgctggact tggggtcccc actgaacacg
     401  ttgcaggggt tatactgaaa gtggtgatca tgtgtgcaag cgtaagtagc
     451  tcagtttacc tagatccagc agggactgta gagttcccaa caggcgcagt
     501  gcccttggac tcgatcattg caattatgaa gaatcgcgct ggtttgagga
     551  aagtttgcag gctgtatgct ccagtcgtgt ggaattacat gctagtccag
     601  aataggccgc cttcggattg gcaagccatg ggattccaat ggaatgcacg
     651  ctttgccgca tttgacacat tcgactatgt gactaatggg gctgcaatcc
     701  agcccgtaga ggggctcata cgcaggccca cgcctgagga aacaatagcc
     751  cacaatgccc acaagagtat ggcaattgac aagtcgaaca gaaatgagcg
     801  attggccaac actaatgttg agtacactgg ggggatgctt ggcgctgaga
     851  ttgtgcgcaa tcaccgtaat gcgatcaacc aatga