Sequence of DPV Tomato spotted wilt virus

Tomato spotted wilt virus isolate P-202/1 nucleocapsid protein (N) gene, complete cds.

ACC No: GU369721

Dated: 2010-02-05 | Length: 777 | CRC: -1847965226

                
ID   GU369721; SV 1; linear; genomic RNA; STD; VRL; 777 BP.
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AC   GU369721;
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DT   05-FEB-2010 (Rel. 103, Created)
DT   05-FEB-2010 (Rel. 103, Last updated, Version 1)
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DE   Tomato spotted wilt virus isolate P-202/1 nucleocapsid protein (N) gene,
DE   complete cds.
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KW   .
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OS   Tomato spotted wilt virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-777
RA   Zindovic J., Tiodorovic J., Krstic B., Bulajic A., Vucurovic A., Turina M.,
RA   Ciuffo M.;
RT   "Molecular characterization of TSWV isolates from the Balkans and Italy";
RL   Unpublished.
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RN   [2]
RP   1-777
RA   Zindovic J., Tiodorovic J., Krstic B., Bulajic A., Vucurovic A., Turina M.,
RA   Ciuffo M.;
RT   ;
RL   Submitted (24-DEC-2009) to the EMBL/GenBank/DDBJ databases.
RL   Department for Plant Protection, Biotechnical Faculty, Mihajla Lalica 1,
RL   Podgorica 81000, Montenegro
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FH   Key             Location/Qualifiers
FH
FT   source          1. .777
FT                   /organism="Tomato spotted wilt virus"
FT                   /host="Capsicum annuum (pepper)"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /isolate="P-202/1"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /collection_date="1999"
FT                   /note="PCR_primers=fwd_name: TSWV-S1983-forward, rev_name:
FT                   TSWV-S2767-reverse"
FT                   /db_xref="taxon:11613"
FT   gene            1. .777
FT                   /gene="N"
FT   CDS             1. .777
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="ADB96079.1"
FT                   /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI
FT                   KKMSVISCLTFLKNRQSIMKAIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA"
XX
SQ   Sequence 777 BP; 257 A; 135 C; 173 G; 212 T; 0 other;

gu369721 Length: 777  05-FEB-2010  Type: N  Check: 8531  ..

       1  atgtctaagg ttaagctcac taaggaaagc attgttgctt tgttgacaca
      51  aggcaaagac cttgagtttg aggaagatca gaatctggta gcattcaact
     101  tcaagacttt ttgtctggaa aacctcgacc agatcaagaa gatgagcgtt
     151  atttcatgtc tgacattcct gaagaatcgt cagagtataa tgaaggctat
     201  taaacaaagt gattttactt ttggtaaaat taccataaag aaaacttcag
     251  acaggattgg agccactgac atgaccttca gaaggcttga tagcttgatc
     301  agggtcaggc ttgtagagga aactgggaat tctgagaatc tcaatactat
     351  caaatctaag attgcttccc accctttgat tcaagcctat ggattacctc
     401  ttgatgatgc aaagtctgtg aggcttgcca taatgctggg aggtagctta
     451  cctcttattg cttcagttga tagctttgag atgatcagtg ttgtcttggc
     501  tatatatcag gatgcaaaat acaaagacct cgggattgac ccaaagaagt
     551  atgacaccag agaagcctta ggaaaagttt gcactgtgct gaaaagcaaa
     601  gcatttgaaa tgaatgaaga tcaggtgaag aaaggaaaag agtatgctgc
     651  tatactcagc tccagcaatc ctaatgctaa aggaagtatt gctatggaac
     701  attacagtga aactcttaac aagttctatg aaatgttcgg ggttaaaaaa
     751  caggcaaaac tcgcagaact tgcttga