Sequence of DPV Homalodisca vitripennis reovirus
Homalodisca vitripennis reovirus isolate Robeson segment 11, complete sequence.
ACC No: GU395198
Dated: 2010-09-28 | Length: 1234 | CRC: -1861734299
ID GU395198; SV 1; linear; genomic RNA; STD; VRL; 1234 BP.
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AC GU395198;
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DT 28-SEP-2010 (Rel. 106, Created)
DT 28-SEP-2010 (Rel. 106, Last updated, Version 1)
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DE Homalodisca vitripennis reovirus isolate Robeson segment 11, complete
DE sequence.
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KW .
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OS Homalodisca vitripennis reovirus
OC Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Phytoreovirus;
OC unclassified Phytoreovirus.
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RN [1]
RP 1-1234
RA Stenger D.C., Sisterson M.S., French R.;
RT "Population genetics of Homalodisca vitripennis reovirus validates timing
RT and limited introduction to California of its invasive insect host, the
RT glassy-winged sharpshooter";
RL Virology 407(1):53-59(2010).
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RN [2]
RP 1-1234
RA Stenger D.C.;
RT ;
RL Submitted (07-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL USDA-ARS, 9611 S. Riverbend Ave., Parlier, CA 93648, USA
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CC GenBank Accession Numbers GU395188-GU395199 represent the complete
CC genome of Homalodisca vitripennis reovirus Robeson isolate.
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FH Key Location/Qualifiers
FH
FT source 1. .1234
FT /organism="Homalodisca vitripennis reovirus"
FT /segment="11"
FT /host="Homalodisca vitripennis"
FT /isolate="Robeson"
FT /mol_type="genomic RNA"
FT /country="USA"
FT /collection_date="2006"
FT /db_xref="taxon:411854"
FT CDS 30. .626
FT /codon_start=1
FT /product="non-structural protein"
FT /protein_id="ADN64698.1"
FT /translation="MNSSVSHVGTITIAPDKDSEQIYKRKKLQLPATLKINYIKDAKYR
FT ICACPSDSHSIDDCPLGGLPQSFVAHKTLWLSSLLHSSSTSANSRKAVLPRIKQSKFRL
FT TDTSRKVKSKSEDATKLERASEKQSEKKSKSSEVQESSEESEGETSHSRLKRHQKSEKK
FT GRKHDSKSTLSTEEVTKLVAAITTEALSKLTRLKD"
FT CDS 629. .1036
FT /codon_start=1
FT /product="hypothetical protein"
FT /protein_id="ADN64699.1"
FT /translation="MSKQAIAIIYAPPGAGKTKWLNNVCKFKDLVLDTDDQPFTGKKAL
FT LAKGKRIVLTNLPLLLVNNEFNITIAIIYSRIEWNRRVSFKCHDFSEMWYDDSVYFSNR
FT AQFKLHPGDSDMSACSDRLETILHDIVSTNM"
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SQ Sequence 1234 BP; 416 A; 210 C; 277 G; 331 T; 0 other;
gu395198 Length: 1234 28-SEP-2010 Type: N Check: 2621 ..
1 ggcattttct cctgaatctg caaattacta tgaatagttc agtctctcat
51 gtcggtacga tcacaatagc tcctgataaa gattcagagc aaatatacaa
101 acgtaaaaaa ctacagcttc cagctacctt gaagatcaat tatatcaagg
151 acgcaaaata taggatttgc gcgtgtccaa gtgatagtca cagtattgac
201 gactgtccat tgggtggatt accacagtct tttgtcgccc acaaaacgct
251 ttggttatca tcgctactgc attcatcatc tacgtctgca aacagtcgga
301 aagctgtttt acctagaata aaacagtcaa agttcagact tactgatact
351 agtcgtaaag tgaaaagtaa gagcgaagac gcaactaaat tggagcgtgc
401 gtctgaaaaa caatcagaga aaaagagtaa gagttctgaa gttcaagaga
451 gtagtgaaga atccgaaggc gaaacttcgc actctcgatt aaagcggcat
501 caaaaatcag aaaagaaagg taggaaacac gactctaaga gcactctttc
551 gactgaggag gtgactaaat tagtggctgc tattacaaca gaagcgctga
601 gtaaacttac tcgtttgaaa gattaagaat gagtaagcag gcaatcgcaa
651 taatatatgc tccacctggt gctggtaaaa ctaagtggtt gaataatgtt
701 tgcaaattta aagatttagt gttggacact gatgatcagc catttactgg
751 taaaaaggca ttgctagcaa aaggaaagag aatagtgtta actaatttgc
801 cgcttttatt agtcaacaat gaatttaata ttaccatagc tataatatat
851 agtagaatag agtggaacag aagagtttca ttcaaatgtc atgattttag
901 tgaaatgtgg tatgacgact ctgtatattt tagtaatagg gcgcagttta
951 aattacatcc aggtgattca gatatgtcag catgcagtga tagattggaa
1001 acaattttgc atgatattgt gtcaactaac atgtagtcta ttagtaaacg
1051 tgcgacgtag aatagggaca aactgtgaaa tagtggcgtg ttgtcaagga
1101 tagttcgcag tcagccggct gtgtggtggt gctgccccca tcactgtgca
1151 gagtcaaccg gagtatcgga actataccga gaggacgtta ctgtagattc
1201 accaagtgac gttggtagcc ggggaataaa tgat