Sequence of DPV Homalodisca vitripennis reovirus

Homalodisca vitripennis reovirus isolate Riverside12 segment 11, complete sequence.

ACC No: GU437841

Dated: 2010-09-28 | Length: 1234 | CRC: -1577121376

                
ID   GU437841; SV 1; linear; genomic RNA; STD; VRL; 1234 BP.
XX
AC   GU437841;
XX
DT   28-SEP-2010 (Rel. 106, Created)
DT   28-SEP-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Homalodisca vitripennis reovirus isolate Riverside12 segment 11, complete
DE   sequence.
XX
KW   .
XX
OS   Homalodisca vitripennis reovirus
OC   Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Phytoreovirus;
OC   unclassified Phytoreovirus.
XX
RN   [1]
RP   1-1234
RA   Stenger D.C., Sisterson M.S., French R.;
RT   "Population genetics of Homalodisca vitripennis reovirus validates timing
RT   and limited introduction to California of its invasive insect host, the
RT   glassy-winged sharpshooter";
RL   Virology 407(1):53-59(2010).
XX
RN   [2]
RP   1-1234
RA   Stenger D.C.;
RT   ;
RL   Submitted (11-JAN-2010) to the EMBL/GenBank/DDBJ databases.
RL   USDA-ARS, 9611 S. Riverbend Ave., Parlier, CA 93648, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1234
FT                   /organism="Homalodisca vitripennis reovirus"
FT                   /segment="11"
FT                   /host="Homalodisca vitripennis"
FT                   /isolate="Riverside12"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Riverside, CA"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:411854"
FT   CDS             30. .626
FT                   /codon_start=1
FT                   /product="non-structural protein"
FT                   /protein_id="ADN64706.1"
FT                   /translation="MNSSVSHVGTITIAPDKDSEQIYKRKKLQLPATLKINYIKDAKYR
FT                   ICACPSDSHSIDDCPLGGLPQSFVAHKTLWLSSLLHSSSTSANSRKAVLPRIKQSKFRL
FT                   TDTSRKVKSKSEDATKLERASEKQLEKKSKSSEVQESSEESEGETSHSRLKRHQKSEKK
FT                   GRKHDSKSTLSTEEVTKLVAAITTEALSKLTRLKD"
FT   CDS             629. .1036
FT                   /codon_start=1
FT                   /product="hypothetical protein"
FT                   /protein_id="ADN64707.1"
FT                   /translation="MSKQAIAIIYAPPGAGKTKWLDNVCKFKDLVLDTDDQPFTGKKAL
FT                   LAKGKKIVLTNLPLLLVNNEFNITIAIIYSRKEWNKRVSFKCNDFSEMWYDDSVYFSNR
FT                   AQFKLHPGDSDMSACNDRLETILHDIVSTNM"
XX
SQ   Sequence 1234 BP; 423 A; 209 C; 272 G; 330 T; 0 other;

gu437841 Length: 1234  28-SEP-2010  Type: N  Check: 1520  ..

       1  ggcattttct cctgaatctg caaattacta tgaatagttc agtctctcat
      51  gtcggtacga tcacaatagc tcctgataaa gattcagagc aaatatataa
     101  acgtaaaaaa ctacagcttc cagctacctt gaagatcaat tacatcaagg
     151  acgcaaaata taggatttgc gcgtgtccaa gtgatagtca cagtattgac
     201  gactgtccat tgggtggatt accacagtct tttgtcgccc acaaaacgct
     251  ttggttatca tcgctactgc attcatcatc tacgtctgca aacagtcgga
     301  aagctgtttt acctagaata aaacagtcaa agttcagact tactgatact
     351  agtcgtaaag tgaaaagtaa gagtgaagac gcaactaaat tggagcgtgc
     401  gtctgaaaaa caattagaga aaaagagtaa gagttctgaa gttcaagaga
     451  gtagcgaaga atccgaaggc gaaacttcgc actctcgatt aaagcggcat
     501  caaaaatcag aaaagaaagg taggaaacac gactctaaga gcaccctttc
     551  gactgaggaa gtgactaaat tagtggctgc tattacaaca gaagcgctga
     601  gtaaacttac tcgtttaaaa gattgagaat gagtaagcag gcaatcgcaa
     651  taatatatgc tccacctggt gctggtaaaa ctaagtggtt ggataacgtt
     701  tgcaaattta aagatttagt gttggatact gatgatcagc catttactgg
     751  taaaaaggca ttgctagcaa aaggaaagaa aatagtgtta actaatttgc
     801  cgcttttatt agtcaacaat gaatttaata ttaccatagc tataatatat
     851  agtagaaaag agtggaacaa aagagtttca ttcaaatgta atgattttag
     901  tgaaatgtgg tatgacgact ctgtatattt tagtaatagg gcgcaattta
     951  aattacatcc aggtgattca gatatgtcag catgcaatga tagattggaa
    1001  acaattttgc atgatattgt gtcaactaac atgtagtcta ttagtaaacg
    1051  tgcgacatag aatagggaca aactgtgaaa tagtggcgtg ttgtcaagga
    1101  tagttcgcag tcagccggct gtgtggtggt gctgccccca tcactgtgca
    1151  gagtcaaccg gagtatcgga actataccga gaggacgtta ctgtagattc
    1201  accaagtgac gttggtagcc ggggaataaa tgat