Sequence of DPV Soybean vein necrosis virus

Soybean vein necrosis virus isolate Fayetteville-3 nucleoprotein (N) gene, complete cds.

ACC No: GU722322

Dated: 2012-03-02 | Length: 834 | CRC: -1314837279

                
ID   GU722322; SV 1; linear; genomic RNA; STD; VRL; 834 BP.
XX
AC   GU722322;
XX
DT   02-MAR-2012 (Rel. 112, Created)
DT   02-MAR-2012 (Rel. 112, Last updated, Version 1)
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DE   Soybean vein necrosis virus isolate Fayetteville-3 nucleoprotein (N) gene,
DE   complete cds.
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KW   .
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OS   Soybean vein necrosis virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
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RN   [1]
RP   1-834
RA   Zhou J.N., Tzanetakis I.E.;
RT   "Soybean vein necrosis virus: a new widespread virus in the United States";
RL   Unpublished.
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RN   [2]
RP   1-834
RA   Zhou J.N., Tzanetakis I.E.;
RT   ;
RL   Submitted (05-FEB-2010) to the INSDC.
RL   Plant Pathology, University of Arkansas, Division of Agriculture, 495 N.
RL   Campus Dr. PTSC 217, Fayetteville, AR 72701, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .834
FT                   /organism="Soybean vein necrosis virus"
FT                   /host="soybean"
FT                   /isolate="Fayetteville-3"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collected_by="I.E. Tzanetakis"
FT                   /collection_date="Sep-2009"
FT                   /db_xref="taxon:980895"
FT   gene            1. .834
FT                   /gene="N"
FT   CDS             1. .834
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleoprotein"
FT                   /protein_id="ADX42517.1"
FT                   /translation="MPQTAGPSNAKPVKLTESNLARLLKFEEDIEFEKNSTGFKFSEFY
FT                   KTHMGRKFRYASALTFLKNRKAIVNMCKKGTFNFDGQTVKLSVESGDDNSFTFKRLDSF
FT                   LRVKMLEHNFAVFDGTNEEAKQSLCNDLATIPLVQAYGLTVKDKMSAKLAIMIGGSLPL
FT                   LASITGCEAYCFGLAIFQDLKKEQLGIVNFDTKAQAAKVASVLDAKGFKFTEEKNQTLR
FT                   LIAEILKDMAPQMRGVASLEKYNEQIGIISDIIGVHFEMPGKKDGKGKKSKEFSV"
XX
SQ   Sequence 834 BP; 284 A; 147 C; 185 G; 218 T; 0 other;

gu722322 Length: 834  02-MAR-2012  Type: N  Check: 380  ..

       1  atgccacaaa cagcaggacc aagcaatgca aaaccagtga agctcactga
      51  gtcaaaccta gcaaggcttc tcaaatttga agaagacata gaatttgaga
     101  aaaacagcac aggattcaag ttcagcgagt tctacaaaac ccacatgggt
     151  cgcaaattca ggtatgcatc tgcattgacc tttctcaaaa acagaaaggc
     201  tattgtcaac atgtgcaaaa aagggacatt taattttgac ggacaaactg
     251  ttaaattgtc tgtagagagt ggtgatgaca atagcttcac ttttaaaaga
     301  ctggatagct ttttgagagt gaagatgctt gaacacaatt ttgcagtttt
     351  tgatggaaca aatgaagagg ctaaacaaag cttgtgcaat gatttagcaa
     401  ccatcccact tgtgcaagct tatggtctga ctgtgaaaga taagatgtca
     451  gcaaagcttg ccataatgat tggtggaagc ttaccccttc tggcatcaat
     501  cacaggttgt gaagcctatt gttttggttt agctatcttt caggacctaa
     551  agaaagaaca gcttggtatt gtcaactttg acacaaaggc tcaagctgct
     601  aaagttgcat ctgtgttgga tgcaaagggc tttaaattca ctgaagagaa
     651  aaatcaaact ctcaggctga ttgctgagat actgaaggac atggcacccc
     701  aaatgagagg agttgcatcc cttgagaagt acaatgaaca gattggaatc
     751  atttctgata tcattggggt ccattttgaa atgcctggaa agaaagatgg
     801  aaaaggcaag aaatcaaagg agttttctgt ttaa