Sequence of DPV Tomato leaf curl Patna betasatellite
Tomato leaf curl betasatellite isolate ToLCB-[IN:Bih6:10], complete sequence.
ACC No: GU732206
Dated: 2013-01-29 | Length: 1357 | CRC: 2115766206
ID GU732206; SV 1; circular; genomic DNA; STD; VRL; 1357 BP.
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AC GU732206;
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DT 27-APR-2010 (Rel. 104, Created)
DT 29-JAN-2013 (Rel. 115, Last updated, Version 3)
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DE Tomato leaf curl betasatellite isolate ToLCB-[IN:Bih6:10], complete
DE sequence.
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KW .
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OS Tomato leaf curl betasatellite
OC Viruses; Satellites; Satellite Nucleic Acids;
OC Single stranded DNA satellites; Betasatellites.
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RN [1]
RP 1-1357
RX PUBMED; 23053516.
RA Kumar J., Singh S.P., Kumar A., Khan J.A., Tuli R.;
RT "Detection and characterization of a new betasatellite: variation in
RT disease symptoms of tomato leaf curl Pakistan virus-India due to associated
RT betasatellite";
RL Arch. Virol. 158(1):257-261(2013).
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RN [2]
RP 1-1357
RA Kumar J., Kumar A., Khan J.A.;
RT "Betasatellite associated with Tomato leaf curl Pakistan virus infecting
RT tobacco in India";
RL Unpublished.
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RN [3]
RP 1-1357
RA Kumar J., Kumar A., Khan J.A.;
RT ;
RL Submitted (09-FEB-2010) to the INSDC.
RL Molecular Virology Lab, National Botanical Research Institute, Rana Pratap
RL Marg, Lucknow, U.P. 226001, India
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FH Key Location/Qualifiers
FH
FT source 1. .1357
FT /organism="Tomato leaf curl betasatellite"
FT /host="tobacco"
FT /isolate="ToLCB-[IN:Bih6:10]"
FT /mol_type="genomic DNA"
FT /country="India:Bihar"
FT /isolation_source="leaf"
FT /db_xref="taxon:220812"
FT gene complement(192. .572)
FT /gene="beta c1"
FT CDS complement(192. .572)
FT /codon_start=1
FT /gene="beta c1"
FT /product="C1"
FT /db_xref="InterPro:IPR018583"
FT /db_xref="UniProtKB/TrEMBL:D5L0W6"
FT /protein_id="ADF42596.1"
FT /translation="MFRPTELTMTIKYDNKRGMEFTVNVRLTNNYSIIVQVDLVSTRSP
FT AIAKTKFLIPYGHHGFTGPFDFNRLEERVCQLLKVMYKDKHTGEFRQEDMVETIDILMM
FT HEAPVIDINVHDLYSVYTSASV"
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SQ Sequence 1357 BP; 463 A; 272 C; 250 G; 372 T; 0 other;
gu732206 Length: 1357 29-JAN-2013 Type: N Check: 4862 ..
1 accgggggcg agcgatgttt ttggtgttcg aggtgggtcc cactttcttc
51 tgaagaagaa aggttgactg ggtcaatgca attgggcggg cgatttgatg
101 ggctttggtt attgggcttc gttattggac tctaaaatat taaaattaaa
151 attttattaa tatctcatac aaatacatcc cgtacacgta ttcatacact
201 tgcactcgta tacacactat ataaatcatg tacattaata tcaatcactg
251 gagcctcgtg catcatcagg atatcaatag tctcgaccat gtcctcttgc
301 cggaattctc ctgtgtgttt atccttgtac atgaccttta acagctgaca
351 taccctttct tcaagacggt tgaagtcaaa tggacctgtg aacccatgat
401 ggccgtatgg gattaagaac ttggtcttgg ctattgccgg tgaccgtgtg
451 gataccaaat ccacctgaac gatgatggaa taattgttgg tcaacctcac
501 attcacagtg aactccatcc ctctcttatt atcatatttg atcgtcattg
551 ttaattctgt gggtctaaac atgagtttag tccctttaaa tagggttcat
601 atatctggat tatggaccaa gtcaattacg tggtctggtc tatgtcacat
651 atattatgtg aagaccttat gtttgatagt gataacacta tcaaatatct
701 aaaaaaataa aaagaaaaga aaatcataat tataacataa ttatgaacaa
751 taaaaaaaga aaaaaaaaaa caaacactaa ataactcaaa caataaacac
801 tatccaaaac ctaaacaaac actaacacaa tcacaatata tattaagaaa
851 agaaaaggga gcgcagcgac gaaacaaaaa agaactgaca acaacaaaaa
901 agaaatcata aaaaataaaa agaaaagaaa aaaacaaaat catgaataat
951 tgggccctac aattatgaat ggtgaaatcc gtacacatga gtcatttact
1001 gttttactgc acggtaaaat agtaaattat gtttacacca aggtaaatat
1051 ttgtacacca ataggtaaat tgaacaccga tacaccgata tatcggtgtt
1101 caatcgggta ctcataaaat aataagactt aagtccctaa aataccctta
1151 tctctgtgtc tggaaggcgc gtgggagtgc gctgcaaaag tagagtttct
1201 ctctcctaaa actcatcgga actccgattc cggcacttcc ggtcaccatt
1251 ttacgacacg cgcggcggtg tgtacccctg ggagggtagg taccatggta
1301 cacgctacgc agcagcctta gctacgccgg agctcagctc gcccccgttc
1351 taatatt