Sequence of DPV Barbel circovirus
Barbel circovirus, complete genome.
ACC No: GU799606
Dated: 2011-04-14 | Length: 1957 | CRC: -365410434
ID GU799606; SV 1; circular; genomic DNA; STD; VRL; 1957 BP. XX AC GU799606; XX DT 14-APR-2011 (Rel. 108, Created) DT 14-APR-2011 (Rel. 108, Last updated, Version 1) XX DE Barbel circovirus, complete genome. XX KW . XX OS Barbel circovirus OC Viruses; ssDNA viruses; Circoviridae; Circovirus; unclassified Circovirus. XX RN [1] RP 1-1957 RA Lorincz M., Csagola A., Farkas S., Szekely C., Tuboly T.; RT "Identification of a circovirus of fish"; RL Unpublished. XX RN [2] RP 1-1957 RA Lorincz M., Csagola A., Farkas S., Szekely C., Tuboly T.; RT ; RL Submitted (16-FEB-2010) to the EMBL/GenBank/DDBJ databases. RL Microbiology and Infectious Diseases, Szent Istvan University Faculty of RL Veterinary Science, Hungaria krt. 23-25., Budapest H-1143, Hungary XX FH Key Location/Qualifiers FH FT source 1. .1957 FT /organism="Barbel circovirus" FT /host="Barbus barbus (barbel)" FT /mol_type="genomic DNA" FT /country="Hungary" FT /collection_date="02-Jul-2008" FT /db_xref="taxon:759938" FT CDS 48. .1007 FT /codon_start=1 FT /product="putative replication protein" FT /protein_id="ADG27890.1" FT /translation="MPKATSKTRHLQNPRQDAPRREQPVKRWCFTLNNPTAEERRHIQE FT IITADAVDFAVIGNEVGDSGTPHLQGFLNMKTKRRLGTMKKWFNARAHYEAAKGTDLQN FT DEYCTKGGDTYLRIGEPGKERCRNDLQKAIDVVKRSSGSMRAVAEACPATFIRYGRGLR FT DYANVMQYRKPRDFKTEVNVYVGDPGCGKSRKASELCAGTTVYYKPRGMWWDGYDGQEN FT VIVDDFYGWMPCDELLRVFDRYPCKVPVKGAYVEFVSTNIYVTSNKHVWQWYKFEGFDP FT AAVMRRVNVYLVYDNAGERFVNLRESAMYDPVTMRYCY" FT CDS complement(1261. .1761) FT /codon_start=1 FT /product="putative capsid protein" FT /protein_id="ADG27891.1" FT /translation="MTWNATSGLSSGIVFLLSDVSYPKNYWDYYKISKVVVQLWPEFNN FT VPINADRDKVLYGSTAVDYDDATMATSTADPFKDYSSRKMFISNRTHIRIFTPRPNIEI FT YKSSASTNYGFLNIRSGAWINTVHDGVPHYGLKIWLPSNTGAPSAIGYKLIIKYYVLFR FT NRI" XX SQ Sequence 1957 BP; 534 A; 416 C; 511 G; 496 T; 0 other; gu799606 Length: 1957 14-APR-2011 Type: N Check: 339 .. 1 accagtcact gcggcaccaa gcaccactgc agatactaac cgaaatcatg 51 cctaaggcca cgtctaagac gcgacatttg cagaacccgc gacaagatgc 101 tccgcggcgc gaacaacctg tgaaaagatg gtgtttcacc ctgaacaacc 151 ctacggctga ggagcgtcgc catattcaag agataataac ggcggacgcc 201 gtagactttg ccgtgatcgg caatgaagta ggtgacagtg ggacaccgca 251 tcttcaagga tttctgaata tgaaaacaaa acgtcggctg ggaactatga 301 aaaagtggtt taacgctaga gctcactacg aggccgctaa aggcacggat 351 ctacaaaacg acgaatactg cacaaagggc ggcgatactt accttcgcat 401 cggtgaaccg ggcaaagaac gctgcagaaa cgatcttcaa aaggcgatag 451 acgttgtgaa gagatcctcc gggagtatgc gggcagttgc cgaggcttgt 501 cccgctactt ttattcgtta tgggcggggt ctacgtgatt acgccaacgt 551 gatgcagtac cggaagccac gtgatttcaa aacggaagtg aatgtttacg 601 tcggagaccc cggatgtgga aagagccgga aggcgtcgga gctttgtgca 651 ggcaccactg tgtactataa gcctcgcggt atgtggtggg atggatacga 701 tggacaagag aatgtaattg tcgatgactt ttacggctgg atgccatgtg 751 atgaactgtt gagagtgttt gatcgatatc cttgtaaagt accggtaaaa 801 ggagcctatg tggaatttgt gtcaactaat atatatgtga cgtctaacaa 851 gcatgtgtgg caatggtata agtttgaagg gtttgacccc gccgccgtca 901 tgagacgggt taatgtgtat cttgtgtacg acaatgccgg ggagagattt 951 gtcaatctcc gtgaatcggc tatgtatgac cctgttacca tgagatattg 1001 ttattgaata aacaaacgat gaagaagtac taaaatgcct tttatttttg 1051 ttgacaatat taaaaagaac cgatcatttt tgtacatttt ttttgtttta 1101 catgcttaac aaacaaacat aaagtaagga ggtgtctccg ttagaagttt 1151 ctccgttaga attgcactga agtcaagtac agaatccttc agtgcgcgga 1201 gcgccggtgg agggccggag gcccgacacc tctggtacgg cgtagccgta 1251 gcctacgccg ttaaatccgg tttctgaata agacgtagta tttgataatt 1301 agtttgtacc cgattgcaga aggggccccg gtgtttgaag gtaaccatat 1351 tttgagcccg taatgaggta cgccgtcgtg tactgtgtta atccatgcac 1401 cggatcgaat attcagaaat ccgtagttgg tagaggcgga agacttgtaa 1451 atttcaatat tgggacgagg agtaaagatc ctaatatgtg tcctgttcga 1501 aataaacatt tttctagagg agtagtcctt aaacggatct gcagtgctag 1551 tagccatggt agcgtcgtcg taatcgacag ctgtgctacc gtaaaggacc 1601 ttatctctgt cagcgttaat tggaacgttg ttgaattcag gccacagttg 1651 cacgacaact ttactgatct tataatagtc ccagtagttc tttggatacg 1701 acacatcaga caataagaaa acaattcccg aagagagccc gctggtagca 1751 ttccaggtca aatgatcgtg tttgatagct cgtaaacgga agtaggagta 1801 tcgtcctgtg tgtcgccttc ttctgacgta cttccgtcgc cgccatccac 1851 gtgagctccg acgccttccg gctcgtcgtc tggcacgcct tctggggagg 1901 agaaatcaat tagtgacgcg tatataaccg gaagtgccgc agtgactgcc 1951 tagtatt