Sequence of DPV Iris yellow spot virus

Iris yellow spot virus from Sri Lanka nucleocapsid protein (N) gene, complete cds.

ACC No: GU901211

Dated: 2010-08-26 | Length: 822 | CRC: 1887958500

                
ID   GU901211; SV 1; linear; genomic RNA; STD; VRL; 822 BP.
XX
AC   GU901211;
XX
DT   21-APR-2010 (Rel. 104, Created)
DT   26-AUG-2010 (Rel. 105, Last updated, Version 2)
XX
DE   Iris yellow spot virus from Sri Lanka nucleocapsid protein (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Iris yellow spot virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus.
XX
RN   [1]
RP   1-822
RA   Widana Gamage S.M.K., Hassani-Mehraban A., Peters D.;
RT   "Identification of Iris yellow spot virus on Leek (Allium porrum) in Sri
RT   Lanka";
RL   Plant Dis. 94(8):1070-1070(2010).
XX
RN   [2]
RP   1-822
RA   Widana Gamage S.M.K., Hassani-Mehraban A., Peters D.;
RT   ;
RL   Submitted (19-FEB-2010) to the EMBL/GenBank/DDBJ databases.
RL   Laboratory of Virology, Wageningen University, Droevendaalsesteeg 1,
RL   Wageningen 6708PB, The Netherlands
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .822
FT                   /organism="Iris yellow spot virus"
FT                   /segment="S"
FT                   /host="Allium porrum (leek)"
FT                   /mol_type="genomic RNA"
FT                   /country="Sri Lanka"
FT                   /collection_date="Aug-2009"
FT                   /db_xref="taxon:60456"
FT   gene            1. .822
FT                   /gene="N"
FT   CDS             1. .822
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:D5LGN5"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:D5LGN5"
FT                   /protein_id="ADF31305.1"
FT                   /translation="MSTVRVKPSEIEKLLSGGDVDVVIESDETEGFNFKNFVLANEGVQ
FT                   MTFNNGYTILRNRAGIYKTIKSGKFTFQGKTIVIPSANVSPNQDDWTFRRLEGFIRARM
FT                   LVELIETKNEKEKQKMYEKICGLPLVSAYGLKPSSNFDATTARIMLTLGGPLTLLASLD
FT                   IFAAAALPLAYFQNVKKEALGISRFSTYEQLCKVARVMAAKEFKFTEKYKKIFDETVKI
FT                   LTDCTPGTSGAASLIKFNEQIKILEGAFGKIVEDIGESSKPKNPSKKDRYN"
XX
SQ   Sequence 822 BP; 277 A; 147 C; 179 G; 219 T; 0 other;

gu901211 Length: 822  26-AUG-2010  Type: N  Check: 5968  ..

       1  atgtctaccg ttagggtgaa accgtctgaa atcgagaaac ttctgtctgg
      51  cggagatgtg gatgtggtga ttgaatctga tgagactgaa ggattcaatt
     101  tcaagaattt tgtgttggca aacgaaggtg tccaaatgac attcaataat
     151  ggctacacaa ttcttagaaa cagagcaggc atttacaaga caataaaatc
     201  agggaaattc acattccaag gaaagaccat tgttattcct agtgctaatg
     251  ttagtcccaa tcaagacgat tggacattca ggaggttgga aggctttatc
     301  agagccagaa tgctcgtaga actgattgaa acaaagaatg aaaaagagaa
     351  gcagaaaatg tatgaaaaaa tctgcgggct tcctctggtg agcgcatatg
     401  gtttaaagcc tagtagcaac tttgatgcaa ctacagctag gatcatgctg
     451  acactaggtg gtcctctcac tttgctagca agtcttgaca tctttgctgc
     501  agctgctctt ccattagctt atttccagaa tgtaaaaaaa gaagcactcg
     551  gtataagcag attctcaact tatgagcaac tctgtaaagt tgcaagagtc
     601  atggcagcaa aggaattcaa attcacagag aaatacaaaa agatttttga
     651  tgaaactgta aagatcctca ctgactgcac tcctggaact tcgggtgctg
     701  cttcattgat caaattcaat gaacagatta aaattcttga aggtgctttt
     751  ggaaagattg ttgaagacat tggtgagtct tctaaaccca aaaatccctc
     801  caagaaggac agatataact ag