Sequence of DPV Tobacco vein banding mosaic virus
Tobacco vein banding mosaic virus isolate SDWF3 helper component-proteinase gene, partial cds.
ACC No: GU904088
Dated: 2011-05-31 | Length: 1374 | CRC: -2105115332
ID GU904088; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
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AC GU904088;
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DT 31-MAY-2011 (Rel. 109, Created)
DT 31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE Tobacco vein banding mosaic virus isolate SDWF3 helper component-proteinase
DE gene, partial cds.
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KW .
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OS Tobacco vein banding mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1374
RX PUBMED; 21497622.
RA Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT "Molecular variability of Tobacco vein banding mosaic virus populations";
RL Virus Res. 158(1-2):188-198(2011).
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RN [2]
RP 1-1374
RA Zhang C., Gao R., Li X.;
RT ;
RL Submitted (08-FEB-2010) to the INSDC.
RL Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL Daizong Street, Tai'an, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /organism="Tobacco vein banding mosaic virus"
FT /host="tobacco"
FT /isolate="SDWF3"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:33765"
FT CDS <1. .>1374
FT /codon_start=1
FT /product="helper component-proteinase"
FT /note="HC-Pro"
FT /protein_id="ADG86700.1"
FT /translation="SAAEQFWKGFDETFRSFRTTTTMHERKNNVLDVVQCGEVAGIICQ
FT SLMPCCRITCIQCANEYATKSAEEVRTHIENTLSKGISGIQQRYPNFPHTIALLETYKT
FT MLNSVNTNREACGKVHFLIGDRTEQPFSHVLRVNEVLIKGNRATSSELSMASNELLEVA
FT RYLRNRTDNIKKGSLATFRNKVSAKAHINPSLMCDNQLDANGNFVWGKRGYHAKRFFAN
FT YFDVIQPADGYDKFIVRKFPNGSRKLAIQNLILPRNLDTLMKQLEGESIELQPLTQSCI
FT SKRHERNIYPCCCVTLEDGTPEYSEFKAPTKNHIVLGNSGDSKYLDMPADISENLYIAK
FT EGYCYINIFLAMLVNVDEKDAKDYTKWVRDVVTGQLKEWPTMIQVALACYQLSVLFPSV
FT KTAELPRILVDHKTQTMHVIDSYGSATTGYHILKANTVSQLEKFASDTLESEMKHYRVG
FT "
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SQ Sequence 1374 BP; 448 A; 262 C; 309 G; 355 T; 0 other;
gu904088 Length: 1374 31-MAY-2011 Type: N Check: 1164 ..
1 tcagcggcgg agcaattctg gaaaggtttt gatgaaactt ttagaagttt
51 tcgaaccaca acaacgatgc atgaacggaa aaacaatgtc ctcgatgttg
101 tgcagtgtgg ggaagtggcc ggtattatat gtcaatcttt aatgccctgc
151 tgtagaataa cgtgcattca atgcgcaaat gagtacgcaa cgaagagtgc
201 ggaagaagtc cgaacccaca ttgaaaacac actcagtaag ggtattagtg
251 ggatccaaca gagataccca aactttccac acacaatagc actccttgag
301 acatacaaga ctatgctcaa ttctgtaaat acaaacagag aagcttgtgg
351 aaaggttcat ttcttaattg gtgatcgaac agaacaacct ttttctcatg
401 ttctccgagt gaatgaagtt ttgatcaaag ggaacagagc cactagttct
451 gaattaagta tggcatctaa cgaactttta gaagtggcta gatacttgag
501 gaacaggact gataatatta agaagggatc gcttgcaacg ttccgaaata
551 aagtttcggc aaaagctcac atcaacccct ctttaatgtg cgataaccaa
601 ttggatgcaa atggcaattt cgtttggggc aaacgaggtt atcatgcgaa
651 gcgtttcttc gcaaactatt ttgatgttat tcaaccggct gatgggtatg
701 acaagttcat tgttcggaaa tttccgaatg gctcccggaa gttagcgata
751 caaaacttga ttctcccgcg gaatttggat acgctgatga aacaactcga
801 aggggagagc atagagttac aaccgctaac tcaaagttgc ataagcaagc
851 ggcatgaacg gaacatttat ccttgctgtt gtgtaacact ggaggatgga
901 acgcctgaat attcagaatt taaggcaccg actaaaaacc acatagtcct
951 tgggaactca ggagattcca aatatcttga tatgccagcc gatatcagtg
1001 aaaacttgta tatcgcgaaa gagggatact gttatatcaa catatttttg
1051 gccatgctcg tgaatgttga tgaaaaagat gctaaagact acacaaagtg
1101 ggtgcgcgat gtagtcactg gacaactaaa ggaatggcca acaatgatcc
1151 aggttgcact tgcatgttat cagctatcag tgctatttcc atcagtcaaa
1201 acagcagaat tgccgagaat tttggtggat cataaaactc aaaccatgca
1251 tgtaattgat tcgtatggct cagctaccac gggatatcat attctgaagg
1301 caaacacagt tagtcaacta gaaaagtttg caagtgatac actcgagtca
1351 gaaatgaagc attatagagt tggt