Sequence of DPV Tobacco vein banding mosaic virus
Tobacco vein banding mosaic virus isolate SDWF5 helper component-proteinase gene, partial cds.
ACC No: GU904090
Dated: 2011-05-31 | Length: 1374 | CRC: 1494114041
ID GU904090; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
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AC GU904090;
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DT 31-MAY-2011 (Rel. 109, Created)
DT 31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE Tobacco vein banding mosaic virus isolate SDWF5 helper component-proteinase
DE gene, partial cds.
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KW .
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OS Tobacco vein banding mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1374
RX PUBMED; 21497622.
RA Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT "Molecular variability of Tobacco vein banding mosaic virus populations";
RL Virus Res. 158(1-2):188-198(2011).
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RN [2]
RP 1-1374
RA Zhang C., Gao R., Li X.;
RT ;
RL Submitted (08-FEB-2010) to the INSDC.
RL Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL Daizong Street, Tai'an, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /organism="Tobacco vein banding mosaic virus"
FT /host="tobacco"
FT /isolate="SDWF5"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:33765"
FT CDS <1. .>1374
FT /codon_start=1
FT /product="helper component-proteinase"
FT /note="HC-Pro"
FT /protein_id="ADG86702.1"
FT /translation="SAAEQFWKGFDETFRSFRTTTTMHERKNNVLDVVQCGEVAGIICQ
FT SLMPCCRITCIQCANEYATKSAEEVRTHIENTLNKGISGIQQRYPNFPHTIALLETYKT
FT MLNSVNTNREACGKVHFLIGDRTEQPFSHVLRVNEVLIKGNRATSSELSMASNELLEVA
FT RYLRNRTDNIKKGSLATFRNKVSAKAHINPSLMCDNQLDANGNFVWGKRGYHAKRFFAN
FT YFDVIQPADGYDKFIIRKFPNGSRKLAIQNLILPRNLDTLMRQLEGESIELQPLTQSCI
FT SKRHERNIYPCCCVTLEDGTPEYSEFKAPTKNHIVLGNSGDSKYLDMPADISENLYIAK
FT EGYCYINIFLAMLVNVDEKDAKDYTKWVRDVVTEQLKEWPTMIQVALACYQLSVLFPSV
FT KSAELPRILVDHKTQTMHVIDSYGSATTGYHILKANTVSQLESLQVIHFESEMKHYRVG
FT "
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SQ Sequence 1374 BP; 447 A; 269 C; 308 G; 350 T; 0 other;
gu904090 Length: 1374 31-MAY-2011 Type: N Check: 6544 ..
1 tcagcggcgg agcaattctg gaaaggtttt gatgaaactt ttagaagttt
51 tcgaaccaca acaacgatgc atgaacggaa gaacaacgtc ctcgatgttg
101 tgcagtgtgg ggaagtggcc ggtattatat gtcaatcttt aatgccctgc
151 tgtagaataa catgcattca atgcgcaaat gagtacgcaa cgaagagtgc
201 ggaggaagtc cgaacccaca ttgaaaacac actcaataag ggtattagtg
251 ggatccaaca gagataccca aactttccac acacaatagc actccttgag
301 acatacaaga ctatgctcaa ttctgtaaat acaaacagag aagcttgtgg
351 aaaggttcat ttcttaattg gtgatcgaac agaacagcct ttttctcacg
401 ttctccgagt gaatgaagtt ttgatcaaag ggaacagagc cactagttct
451 gaattaagta tggcatctaa cgaactttta gaagtggcta gatacttgag
501 gaacaggact gacaatatta agaagggatc gcttgcaacg ttccgaaata
551 aagtttcggc aaaagctcac atcaacccct ctttaatgtg cgataaccaa
601 ttggatgcaa atggcaattt cgtttggggc aaacgaggtt atcatgcgaa
651 gcgtttcttc gcaaactatt tcgatgtcat tcaaccggct gatgggtatg
701 acaagttcat tattcggaaa tttccgaatg gctcccggaa gttagcgata
751 caaaacttga ttctcccgcg gaatttggat acgctgatga gacaacttga
801 aggggagagc atagagttac aaccgctaac tcaaagttgc ataagcaagc
851 gacatgaacg gaacatttat ccttgctgtt gtgtaacact ggaagatgga
901 acgcctgaat attcagaatt taaggcaccg actaaaaacc acatagtcct
951 tgggaactca ggagactcca aatatcttga tatgccagcc gatatcagtg
1001 aaaacttgta tatcgcaaaa gagggatact gttatatcaa catatttttg
1051 gccatgctcg tgaatgttga tgaaaaagat gctaaggact acacaaagtg
1101 ggtgcgcgat gtagtcactg aacaactaaa ggaatggcca acaatgatcc
1151 aggttgcact tgcatgttat cagctatcag tgctatttcc atcagtcaaa
1201 tcagcagaat tgccgagaat tttggtggat cataaaactc aaaccatgca
1251 tgtaattgat tcgtatggct cagctaccac ggggtatcac attctgaagg
1301 caaacacagt tagccaacta gaaagtttgc aagtgataca cttcgagtca
1351 gaaatgaagc attatagagt tggt