Sequence of DPV Tobacco vein banding mosaic virus
Tobacco vein banding mosaic virus isolate SDWF9 helper component-proteinase gene, partial cds.
ACC No: GU904094
Dated: 2011-05-31 | Length: 1374 | CRC: 883636971
ID GU904094; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
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AC GU904094;
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DT 31-MAY-2011 (Rel. 109, Created)
DT 31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE Tobacco vein banding mosaic virus isolate SDWF9 helper component-proteinase
DE gene, partial cds.
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KW .
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OS Tobacco vein banding mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1374
RX PUBMED; 21497622.
RA Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT "Molecular variability of Tobacco vein banding mosaic virus populations";
RL Virus Res. 158(1-2):188-198(2011).
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RN [2]
RP 1-1374
RA Zhang C., Gao R., Li X.;
RT ;
RL Submitted (08-FEB-2010) to the INSDC.
RL Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL Daizong Street, Tai'an, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /organism="Tobacco vein banding mosaic virus"
FT /host="tobacco"
FT /isolate="SDWF9"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:33765"
FT CDS <1. .>1374
FT /codon_start=1
FT /product="helper component-proteinase"
FT /note="HC-Pro"
FT /protein_id="ADG86706.1"
FT /translation="SAAEQFWKGFDETFRSFRTTTTMHERKNNVLDVVQCGEVAGIICQ
FT SLMPCCRITCIQCANEYAMKSAEEVRTHIENTLNKGISGIQQRYPNFPHTIALLETYKT
FT MLNSVNTNREACGKVHFLIGDRTEQPFSHVLRVNEVLIKGNRATTSELNMASNELLEVA
FT RYLRNRTDNIKKGSLATFRNKVSAKAHINPSLMCDNQLDANGNFVWGKRGYHAKRFFAN
FT YFDVIQPADGYDKFIIRKFPNGSRKLAIQNLILPRNLDTLMKQLEGESIELQPLTQSCI
FT SKRHERNIYPCCCVTLEDGTPEYSEFKAPTKNHIVLGNSGDSKYLDMPADISENLYIAK
FT EGYCYINIFLAMLVNVDEKDAKDYTKWVRDVVTEQLKEWPTMIQVALACYQLSVLFPSV
FT KSAELPRILVDHKTQTMHVIDSYGSATTGYHILKANTVSQLEKFASDTLESEMKHYRVG
FT "
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SQ Sequence 1374 BP; 450 A; 269 C; 303 G; 352 T; 0 other;
gu904094 Length: 1374 31-MAY-2011 Type: N Check: 9168 ..
1 tcagcggcgg agcaattctg gaaaggtttt gatgaaacat ttagaagttt
51 tcgaaccaca acaacgatgc acgaacggaa aaacaatgtc ctcgatgttg
101 tgcagtgtgg agaggtggct ggtattatat gtcaatcttt aatgccttgt
151 tgtagaataa catgcattca atgcgcaaat gaatatgcaa tgaagagtgc
201 ggaggaagtt cgaacccaca ttgagaacac actcaataag ggcatcagtg
251 ggatccaaca gagataccca aattttccac acacaatagc actccttgag
301 acatacaaga ctatgctcaa ttctgtcaat acaaacagag aagcttgtgg
351 aaaagtccat ttcttaattg gtgatcgaac agagcaacct ttttctcatg
401 ttcttcgagt gaatgaagtt ttgatcaaag ggaacagagc cactacttct
451 gagttaaata tggcatctaa tgaactctta gaagtggcta gatatttgag
501 gaacagaact gacaacatta agaagggatc gctcgcaaca ttccgaaata
551 aagtttcggc aaaagctcac atcaacccct ctttaatgtg tgataaccaa
601 ttggatgcga atggcaattt cgtttggggt aaacgaggct accatgcaaa
651 gcgtttcttc gcaaactatt ttgacgtcat tcaaccggct gatggatatg
701 acaagttcat tattcggaaa tttccgaatg gctctcggaa gttagctata
751 caaaatttga tcctcccgcg gaatttggat acgctaatga aacaacttga
801 aggggagagc atagagctac aaccgctaac tcaaagttgc ataagcaagc
851 ggcatgagcg gaacatttat ccttgctgtt gtgtaacact agaagatgga
901 acgcctgaat attcagaatt caaggcaccg accaaaaacc acatagtcct
951 tgggaactca ggagattcca aatacctcga tatgccagct gatatcagtg
1001 aaaacttgta tatcgcgaag gagggatact gttatatcaa catattcttg
1051 gccatgcttg tgaatgttga tgagaaagat gctaaggatt acacaaaatg
1101 ggtgcgcgat gtagtcactg agcaattgaa ggagtggcca acaatgattc
1151 aggttgcact tgcatgctac caactatcag tgctatttcc atcagtcaaa
1201 tcagcagaat tgccgagaat tttggtggac cataaaactc agaccatgca
1251 cgtaattgat tcgtatggct ccgctaccac aggatatcac atcttaaagg
1301 caaacacagt cagtcaactg gaaaagtttg caagtgatac acttgagtca
1351 gaaatgaagc attatagagt tggt