Sequence of DPV Tobacco vein banding mosaic virus
Tobacco vein banding mosaic virus isolate SX5 helper component-proteinase gene, partial cds.
ACC No: GU904102
Dated: 2011-05-31 | Length: 1374 | CRC: 1623559960
ID GU904102; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
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AC GU904102;
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DT 31-MAY-2011 (Rel. 109, Created)
DT 31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE Tobacco vein banding mosaic virus isolate SX5 helper component-proteinase
DE gene, partial cds.
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KW .
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OS Tobacco vein banding mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1374
RX PUBMED; 21497622.
RA Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT "Molecular variability of Tobacco vein banding mosaic virus populations";
RL Virus Res. 158(1-2):188-198(2011).
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RN [2]
RP 1-1374
RA Zhang C., Gao R., Li X.;
RT ;
RL Submitted (08-FEB-2010) to the INSDC.
RL Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL Daizong Street, Tai'an, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /organism="Tobacco vein banding mosaic virus"
FT /host="tobacco"
FT /isolate="SX5"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:33765"
FT CDS <1. .>1374
FT /codon_start=1
FT /product="helper component-proteinase"
FT /note="HC-Pro"
FT /protein_id="ADG86714.1"
FT /translation="SAAEQFWKGFDETFRSFRTTTTMHERKNNVLDVVQCGEVAGIICQ
FT SLMPCCRITCIQCANEYATKSAEEVRTHIENTLNKGISGIQQRYPNFPHTIALLETYKT
FT MLNSVNTNREACGKVHFLIGDRTEQPFSHVLRVNEVLIKGNRATSSELSMASNELLEVA
FT RYLRNRTDNIKKGSLATFRNKISAKAHINPSLMCDNQLDANGNFVWGKRGYHAKRFFAN
FT YFDVIQPADGYDKFIIRKFPNGSRKLAIQNLILPRNLDTLMKQLEGESIELQPLTQSCI
FT SKRHERNIYPCCCVTLEDGTPEYSEFKAPTKNHIVLGNSGDSKYLDMPADISENLYIAK
FT EGYCYINIFSAMLVNVDEKDAKDYTKWVRDVVTEQLKEWPTMIQVALACYQLSVLFPSV
FT KSAELPRILVDHKTQTMHVIDSYGSATTGYHILKANTVSQLEKFASDTLESEMKHYRVG
FT "
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SQ Sequence 1374 BP; 450 A; 268 C; 306 G; 350 T; 0 other;
gu904102 Length: 1374 31-MAY-2011 Type: N Check: 5914 ..
1 tcagcggcgg agcaattctg gaaaggtttt gatgaaactt ttaggagttt
51 tcgaaccaca acaacgatgc atgagcggaa aaacaacgtc ctcgatgttg
101 tgcagtgtgg ggaagtggct ggtattatat gtcaatcttt aatgccttgc
151 tgtagaataa catgcattca atgcgcaaat gagtacgcaa cgaagagtgc
201 ggaggaagtc cgaacccaca ttgaaaacac actcaataag ggtattagtg
251 ggatccaaca gagataccca aactttccac acacaatagc actccttgag
301 acatacaaga ctatgctcaa ttctgtaaat acaaacagag aagcttgtgg
351 aaaggttcat ttcctaattg gtgatcgaac agaacaacct ttttctcatg
401 ttctccgagt gaatgaagtt ttgatcaaag ggaacagagc cactagttct
451 gaattaagta tggcatctaa cgaactttta gaagtggcta gatacttgag
501 gaacaggact gacaatatta agaagggatc gctcgcaacg ttccgaaata
551 aaatttcggc aaaagctcac atcaacccct ctttaatgtg cgataaccaa
601 ttggatgcaa atggcaattt cgtttggggc aaacgaggtt atcatgcgaa
651 acgtttcttc gcaaactatt tcgatgtcat tcaaccggct gatgggtatg
701 acaagttcat tattcggaaa tttccgaatg gctcccggaa gttagcgata
751 caaaacttga ttctcccgcg gaatttggat acgctgatga aacaacttga
801 aggggagagt atagagttac aaccgctaac ccagagttgc ataagcaagc
851 ggcatgaacg gaacatttat ccttgctgtt gtgtaacact ggaagatgga
901 acgcccgaat attcagaatt taaggcaccg actaaaaacc acatagtcct
951 tgggaactca ggagactcca aatatcttga tatgccagcc gatatcagtg
1001 aaaacttgta tatcgcgaaa gagggatact gttatatcaa catattttcg
1051 gccatgctcg tgaatgttga tgaaaaagat gctaaggact acacaaagtg
1101 ggtgcgcgat gtagtcactg aacaattaaa ggaatggcca acaatgatcc
1151 aggttgcact tgcatgttat cagctatcag tgctatttcc atcagtcaaa
1201 tcagcagaat tgccgagaat tttggtggat cataaaactc aaaccatgca
1251 tgtaattgat tcgtatggct cagctaccac aggatatcac attctgaagg
1301 caaacacagt tagtcaacta gaaaagtttg caagtgatac actcgagtca
1351 gaaatgaagc attatagagt tggt