Sequence of DPV Tobacco vein banding mosaic virus

Tobacco vein banding mosaic virus isolate SDWF1 polyprotein gene, partial cds.

ACC No: GU904107

Dated: 2011-05-31 | Length: 1200 | CRC: -1314143979

                
ID   GU904107; SV 1; linear; genomic RNA; STD; VRL; 1200 BP.
XX
AC   GU904107;
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DT   31-MAY-2011 (Rel. 109, Created)
DT   31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE   Tobacco vein banding mosaic virus isolate SDWF1 polyprotein gene, partial
DE   cds.
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KW   .
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OS   Tobacco vein banding mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1200
RX   PUBMED; 21497622.
RA   Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT   "Molecular variability of Tobacco vein banding mosaic virus populations";
RL   Virus Res. 158(1-2):188-198(2011).
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RN   [2]
RP   1-1200
RA   Zhang C., Gao R., Li X.;
RT   ;
RL   Submitted (08-FEB-2010) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1200
FT                   /organism="Tobacco vein banding mosaic virus"
FT                   /host="tobacco"
FT                   /isolate="SDWF1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:33765"
FT   CDS             <1. .>1200
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADZ93838.1"
FT                   /translation="GLIEDNVGHHAAVKLLIQSVYKPKVLKTLLMEEPYLIVLSIISPS
FT                   VLIALYKSGSLYRAVQMLQNKKPTLRMVISLLTMLATKVSRADDLYSQYQLIQDHAERF
FT                   REVLNNGDKHSISRRLAEQFIEVQIAVAESNHDTESLGFRTTKVKGLALIEKIYQQDLE
FT                   ELWQGLSLLEKCSCILWQLRHRRKLKVELGENGTLDLSKALVTFRQYAQDNFDKVLSPI
FT                   HKRSHYVTDVPMRILRGVRCRVVGTFSYLFSDLFRFVQVLAVLSVLLAIFNNIYAFTCQ
FT                   YREFKMIEASREEEKKLESLDKLYAHLSYKLGEKPTFEEFHQFVSACNPQLVEFLEVSY
FT                   APVVEHQAVKRASEARLEQIVAFIALVMRIFDNDRSDCVYRVLNKFKNIVGIADQEVIH
FT                   Q"
FT   mat_peptide     1. .1041
FT                   /product="P3"
FT   mat_peptide     1042. .1200
FT                   /product="6K1"
XX
SQ   Sequence 1200 BP; 380 A; 199 C; 275 G; 346 T; 0 other;

gu904107 Length: 1200  31-MAY-2011  Type: N  Check: 7285  ..

       1  gggctgattg aagataatgt aggccaccat gcagctgtca aattgctcat
      51  acaatcagtg tataaaccca aggtcttgaa gacactactg atggaagagc
     101  catatcttat tgttttgagt ataatatcac catcagttct catcgcacta
     151  tataagagtg gtagtcttta cagagcagtc caaatgttac aaaacaaaaa
     201  acccactctt cggatggtaa taagtttgct gaccatgcta gctacaaagg
     251  tttcgagagc agatgatttg tatagccagt accaactaat acaagatcat
     301  gcagagcgct tccgtgaggt tcttaataat ggggacaaac atagcatttc
     351  gaggcgtctc gcagagcaat ttattgaggt gcaaatcgct gtagctgaat
     401  cgaaccatga tactgaatca cttgggtttc gaacaacaaa ggtgaagggt
     451  ttggcactta ttgaaaaaat ctatcaacaa gatttggagg agctttggca
     501  aggtttatca ttgttggaaa agtgctcatg tatactatgg caattaaggc
     551  atcgaagaaa attaaaggta gaactgggcg agaacggtac gctagacttg
     601  tcgaaagcct tagttacatt caggcaatat gcacaggaca actttgacaa
     651  ggtactgtca cctatacata agcgttcaca ctatgtgacg gatgttccaa
     701  tgcgtatact cagaggagtg agatgtagag tagtaggaac tttttcttat
     751  ctgttttctg atttatttag atttgtacag gttttggcag ttttaagtgt
     801  gttattagca atttttaata atatttatgc tttcacatgt caatatagag
     851  agtttaagat gatagaggca tctagggagg aagagaagaa attagagagt
     901  ttggataagc tctatgctca tctaagctac aaacttggag agaaaccaac
     951  attcgaggag tttcaccaat ttgtatctgc ttgcaatcca cagttagttg
    1001  aattcctcga ggttagttat gccccggtgg ttgaacacca ggctgtgaag
    1051  cgagcgtcgg aagcacgact agaacaaata gttgcattta tagctctggt
    1101  gatgaggatc tttgataatg ataggagtga ttgtgtctat agagttctaa
    1151  acaaattcaa gaacatagtt ggtatcgcag atcaagaggt gattcatcaa