Sequence of DPV Tobacco vein banding mosaic virus
Tobacco vein banding mosaic virus isolate GSZN5 helper component-proteinase gene, partial cds.
ACC No: GU904109
Dated: 2011-05-31 | Length: 1374 | CRC: 765378061
ID GU904109; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
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AC GU904109;
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DT 31-MAY-2011 (Rel. 109, Created)
DT 31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE Tobacco vein banding mosaic virus isolate GSZN5 helper component-proteinase
DE gene, partial cds.
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KW .
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OS Tobacco vein banding mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1374
RX PUBMED; 21497622.
RA Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT "Molecular variability of Tobacco vein banding mosaic virus populations";
RL Virus Res. 158(1-2):188-198(2011).
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RN [2]
RP 1-1374
RA Zhang C., Gao R., Li X.;
RT ;
RL Submitted (08-FEB-2010) to the INSDC.
RL Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL Daizong Street, Tai'an, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /organism="Tobacco vein banding mosaic virus"
FT /host="tobacco"
FT /isolate="GSZN5"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:33765"
FT CDS <1. .>1374
FT /codon_start=1
FT /product="helper component-proteinase"
FT /note="HC-Pro"
FT /protein_id="ADG86720.1"
FT /translation="SAAEQFWKGFDETFRSFRTTTTMHERKNNVLDVVQCGEVAGIICQ
FT SLMPCCRITCIQCANEYAMKSAEEVRTHIENTLNKGISGIQQRYPNFPHTIALLETYRT
FT MLNSVNTNREACGKVHFLIGDRTEQPFSHVLRVNEVLIKGNRATSSELNMASNELLEVA
FT RYLRNRTDNIKKGSLATFRNKVSAKAHINPSLMCDNQLDANGNFVWGKRGYHAKRFFAN
FT YFDVIQPADGYDKFIIRKFPNGSRKLAIQNLILPRNLDTLMKQLVGESIELQPLTQSCI
FT SKRHERNIYPCCCVTLEDGTPEYSEFKAPTKNHIVLGNSGDSKYLDMPADISENLYIAK
FT EGYCYINIFLAMLVNVDEKDAKDYTKWVRDVVTEQLKEWPTMIQVALACYQLSVLFPSV
FT KSAELPRILVDHKTQTMHVIDSYGSATTGYHILKANTVSQLEKFASDTLESKMKHYRVG
FT "
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SQ Sequence 1374 BP; 453 A; 262 C; 302 G; 357 T; 0 other;
gu904109 Length: 1374 31-MAY-2011 Type: N Check: 9012 ..
1 tcagcggcgg agcaattctg gaaaggtttt gatgaaactt ttagaagttt
51 tcgaaccaca acaacgatgc atgaacggaa aaacaacgtc ctcgacgttg
101 tgcagtgtgg agaagtggct ggtattatat gtcaatcttt aatgccttgc
151 tgtagaataa catgcattca atgcgcaaat gagtacgcaa tgaagagtgc
201 agaggaagtc cgaacccaca ttgaaaacac actcaataag ggtattagtg
251 ggatccaaca gagataccca aactttccgc acacaatagc acttcttgag
301 acatacagga ctatgctcaa ttctgtgaat acaaacagag aagcttgtgg
351 aaaggttcat ttcctaattg gtgatcgaac agaacaacct ttttctcatg
401 ttctccgagt gaatgaagtt ttgatcaaag ggaacagagc cactagttct
451 gaattaaata tggcatctaa cgaactttta gaagtggcta gatacttgag
501 aaacaggact gacaatatta agaagggatc gcttgcaacg ttccgaaata
551 aagtttcggc aaaagctcac atcaacccct ctttaatgtg cgataaccaa
601 ttggatgcaa atggcaattt cgtttggggc aaacgaggtt atcatgcgaa
651 gcgtttcttt gcaaactatt ttgatgtcat tcaaccggct gatggatatg
701 acaagttcat tattcggaaa tttccgaatg gctcccggaa gttagcgata
751 caaaacttga ttctcccgcg gaatttggat acgctgatga aacaacttgt
801 aggggagagc atagagctac aaccgctaac ccaaagttgc ataagtaagc
851 ggcatgaacg gaacatctat ccttgctgtt gtgtaacact ggaagatgga
901 acgcctgaat attcagaatt taaggcaccg actaaaaacc acatagtcct
951 tgggaactca ggagactcca aatatcttga tatgccagcc gatatcagtg
1001 aaaacttgta tatcgcgaaa gagggatact gttatatcaa tatatttttg
1051 gctatgctcg tgaatgttga tgaaaaagat gctaaggact acacaaagtg
1101 ggtgcgcgac gtagtcactg aacaattaaa ggaatggcca acaatgatcc
1151 aggttgcact tgcatgttat cagctatcag tgctatttcc atcagtcaaa
1201 tcagcagaat tgccgagaat tttggtggat cataaaactc aaaccatgca
1251 tgtaattgat tcgtatggct cagctaccac aggatatcac attctgaagg
1301 caaacacagt tagtcaacta gaaaagtttg caagtgatac acttgagtca
1351 aaaatgaagc attatagagt tggt