Sequence of DPV Tobacco vein banding mosaic virus
Tobacco vein banding mosaic virus isolate YN12 helper component-proteinase gene, partial cds.
ACC No: GU904114
Dated: 2011-05-31 | Length: 1374 | CRC: -1159866144
ID GU904114; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
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AC GU904114;
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DT 31-MAY-2011 (Rel. 109, Created)
DT 31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE Tobacco vein banding mosaic virus isolate YN12 helper component-proteinase
DE gene, partial cds.
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KW .
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OS Tobacco vein banding mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1374
RX PUBMED; 21497622.
RA Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT "Molecular variability of Tobacco vein banding mosaic virus populations";
RL Virus Res. 158(1-2):188-198(2011).
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RN [2]
RP 1-1374
RA Zhang C., Gao R., Li X.;
RT ;
RL Submitted (08-FEB-2010) to the INSDC.
RL Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL Daizong Street, Tai'an, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /organism="Tobacco vein banding mosaic virus"
FT /host="tobacco"
FT /isolate="YN12"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:33765"
FT CDS <1. .>1374
FT /codon_start=1
FT /product="helper component-proteinase"
FT /note="HC-Pro"
FT /protein_id="ADG86725.1"
FT /translation="SAAEQFWKGFDETFRSFRTTTKMHERTNNVLDVVQCGEVAGIICQ
FT SLMPCCRITCIQCANEYATKSAEEVRIHIENTLNKGISGIQQKYPNFPHTIALLETYKT
FT MINSVNTNREACGKVHFLIGDRTEQPFSHVLRVNEVLIKGNRATNSELNMASNELLEVA
FT RYLRNRTDNIKKGSLATFRNKVSAKAHINPSLMCDNQLDANGNFVWGKRGYHAKRFFAN
FT YFDVIQPADGYDKYIMRKFPNGSRKLAIQNLILPRNLDTLMKQLEGESIELQPLTQSCI
FT SKRHERNIYPCCCVTLEDGTPEYSEFKAPTKNHIVLGNSGDSKYLDMPADISENLYIAK
FT EGYCYINIFLAMLVNVDEKDAKDYTRWVRDVVTEQLKEWPTMIQVALACYQLSVLFPSV
FT KSAELPRILVDHKTQTMHVIDSYGSATTGYHILKANTVSQLEKFASDTLESEMKHYRVG
FT "
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SQ Sequence 1374 BP; 453 A; 272 C; 304 G; 345 T; 0 other;
gu904114 Length: 1374 31-MAY-2011 Type: N Check: 3954 ..
1 tcagcggcgg agcaattctg gaaaggtttc gatgaaactt ttaggagttt
51 tcgaaccaca acaaagatgc atgaacggac gaataatgtc cttgatgttg
101 tgcagtgtgg agaagtagct ggtattatat gtcaatctct aatgccttgt
151 tgtagaataa catgcattca gtgcgcaaat gagtatgcaa cgaagagtgc
201 ggaggaagtc cgaatccaca ttgagaacac actcaataag ggtattagtg
251 gaatccaaca gaaataccca aattttccgc acacaatagc actccttgag
301 acatacaaga ctatgatcaa ttctgtcaat acaaacagag aagcttgtgg
351 gaaagttcat tttctaattg gtgaccgaac agaacaacct ttctctcatg
401 ttctccgagt gaacgaagtt ttgattaaag gaaacagggc caccaattct
451 gaactaaata tggcatccaa cgaactcttg gaagtggcta ggtacttgag
501 gaacagaact gacaacatta agaagggatc gcttgcaaca ttccgaaata
551 aagtttcagc aaaagctcac atcaaccctt ctttaatgtg tgataaccaa
601 ttggatgcaa acggcaactt cgtttggggc aaacgaggct accatgcgaa
651 gcgtttcttc gcaaattatt ttgatgtcat tcaaccggct gatgggtatg
701 acaagtacat catgcggaaa tttccaaacg gttctcggaa gttagctata
751 caaaacttga tcctcccacg aaatttggac acgttgatga aacaacttga
801 aggggagagc atagagctac aaccgctaac ccaaagttgc ataagcaagc
851 ggcatgagcg aaacatttat ccttgctgtt gtgtgacatt ggaagatgga
901 acgcctgaat attcagaatt taaggcaccg actaagaatc acatagtcct
951 cggaaattca ggagactcca aatacctcga tatgccagcc gacatcagtg
1001 aaaacttgta tatcgcaaaa gaggggtatt gttatatcaa catattccta
1051 gccatgctcg tgaatgtcga tgaaaaagat gctaaggatt atacaaggtg
1101 ggtgcgtgat gtagtcactg aacaactaaa ggagtggcca acaatgattc
1151 aggttgcact tgcatgctat cagctatcag tactgtttcc atcagtcaaa
1201 tcagcggaac taccaagaat tttggtggac cacaagactc aaaccatgca
1251 tgtgattgat tcgtatggtt cagctaccac agggtatcac atcctgaagg
1301 caaacacagt tagtcaacta gaaaagtttg caagtgatac acttgagtca
1351 gaaatgaagc attatagagt tggt