Sequence of DPV Tobacco vein banding mosaic virus
Tobacco vein banding mosaic virus isolate YN8 helper component-proteinase gene, partial cds.
ACC No: GU904116
Dated: 2011-05-31 | Length: 1374 | CRC: 921255365
ID GU904116; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
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AC GU904116;
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DT 31-MAY-2011 (Rel. 109, Created)
DT 31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE Tobacco vein banding mosaic virus isolate YN8 helper component-proteinase
DE gene, partial cds.
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KW .
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OS Tobacco vein banding mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1374
RX PUBMED; 21497622.
RA Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT "Molecular variability of Tobacco vein banding mosaic virus populations";
RL Virus Res. 158(1-2):188-198(2011).
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RN [2]
RP 1-1374
RA Zhang C., Gao R., Li X.;
RT ;
RL Submitted (08-FEB-2010) to the INSDC.
RL Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL Daizong Street, Tai'an, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /organism="Tobacco vein banding mosaic virus"
FT /host="tobacco"
FT /isolate="YN8"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:33765"
FT CDS <1. .>1374
FT /codon_start=1
FT /product="helper component-proteinase"
FT /note="HC-Pro"
FT /protein_id="ADG86727.1"
FT /translation="SAAEQFWKGFDETFRSFRTTTKMHERTNNVLDVVQCGEVAGIICQ
FT SLMPCCRITCIQCANEYATKSAEEVRTHIENTLNKGISGIQQRYPNFPHTIALLETYKI
FT MINSVNTNREACGKVHFLIGDRTEQPFSHVLRVNEVLIKGNRATNSELNMASNELLEVA
FT RYLRNRTDNIKKGSLATFRNKVSAKAHINPSLMCDNQLDANGNFVWGKRGYHAKRFFAN
FT YFDVIQPADGYDKYIMRKFPNGSRKLAIQNLILPRNLDTLMKQLEGESIELQPLTQSCI
FT SKRHERNIYPCCCVTLEDGTPEYSEFKAPTRNHIVLGNSGDSKYLDMPADISENLYIAK
FT EGYCYINIFLAMLVNVDEKDAKDYTKWVRDVVTEQLKEWPAMIQVALACYQLSVLFPSV
FT KSAELPRVLVDHKTQTMHVIDSYGSATTGYHILKANTVSQLEKFASDTLESEMKHYRVG
FT "
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SQ Sequence 1374 BP; 447 A; 272 C; 309 G; 346 T; 0 other;
gu904116 Length: 1374 31-MAY-2011 Type: N Check: 5731 ..
1 tcagcggcgg agcaattctg gaaaggtttc gatgaaactt ttagaagttt
51 tcgaaccaca acaaagatgc atgaacggac gaataatgtc cttgatgttg
101 tgcagtgtgg ggaagtagct ggtattatat gtcaatctct aatgccttgt
151 tgtagaataa catgcattca gtgcgcaaat gagtatgcaa cgaagagtgc
201 ggaggaagtc cgaacccata ttgagaacac actcaataag ggtattagtg
251 gaatccaaca gagataccca aattttccgc acacaatagc actccttgag
301 acatacaaga ttatgatcaa ctctgtcaat acaaacagag aagcttgtgg
351 gaaagttcat tttctaattg gtgaccgaac agaacaacct ttctctcatg
401 ttctccgagt gaacgaagtt ttgattaaag ggaacagagc caccaattct
451 gagctaaata tggcatccaa cgaactcttg gaagttgcca ggtacttgag
501 gaacagaact gacaacatta agaagggatc gcttgcaaca ttccgaaata
551 aagtttcagc aaaagctcac atcaacccct ctttaatgtg tgataaccaa
601 ttggatgcaa acggcaactt cgtttggggc aaacggggct atcatgcgaa
651 gcgtttcttc gcaaattact ttgatgtcat tcaaccggct gatgggtatg
701 acaagtacat tatgcggaaa tttccaaacg gttctcggaa gttagctata
751 caaaacttga tcctcccgcg aaatttggac acgttgatga aacaacttga
801 aggggagagc atagagctac aaccgttaac ccaaagttgc ataagcaagc
851 ggcatgagcg aaacatttat ccttgttgtt gtgtgacatt ggaagatgga
901 acgcctgaat attcagaatt taaggcaccg actaggaacc acatagtcct
951 cggaaactca ggagactcca aatacctcga tatgccagcc gacatcagtg
1001 aaaacttgta tatcgcaaaa gaggggtatt gttatatcaa catattttta
1051 gccatgctcg tgaatgttga tgaaaaagat gctaaggact atacaaagtg
1101 ggtgcgtgat gtggtcactg aacagctaaa ggagtggcca gcaatgattc
1151 aggttgcact tgcatgctat cagctatcag tactgtttcc atcagtcaaa
1201 tcagcggaac taccaagagt tttggtggat cacaagactc aaaccatgca
1251 tgtaatcgat tcatatggct cagctaccac agggtatcac atcctgaagg
1301 caaacacagt tagtcaacta gaaaagtttg caagtgatac acttgagtca
1351 gaaatgaagc attatagagt tggt