Sequence of DPV Tobacco vein banding mosaic virus
Tobacco vein banding mosaic virus isolate GSZN28 helper component-proteinase gene, partial cds.
ACC No: GU904124
Dated: 2011-05-31 | Length: 1374 | CRC: -1882873419
ID GU904124; SV 1; linear; genomic RNA; STD; VRL; 1374 BP.
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AC GU904124;
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DT 31-MAY-2011 (Rel. 109, Created)
DT 31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE Tobacco vein banding mosaic virus isolate GSZN28 helper
DE component-proteinase gene, partial cds.
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KW .
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OS Tobacco vein banding mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
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RN [1]
RP 1-1374
RX PUBMED; 21497622.
RA Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT "Molecular variability of Tobacco vein banding mosaic virus populations";
RL Virus Res. 158(1-2):188-198(2011).
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RN [2]
RP 1-1374
RA Zhang C., Gao R., Li X.;
RT ;
RL Submitted (08-FEB-2010) to the INSDC.
RL Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL Daizong Street, Tai'an, Shandong 271018, China
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FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /organism="Tobacco vein banding mosaic virus"
FT /host="tobacco"
FT /isolate="GSZN28"
FT /mol_type="genomic RNA"
FT /country="China"
FT /db_xref="taxon:33765"
FT CDS <1. .>1374
FT /codon_start=1
FT /product="helper component-proteinase"
FT /note="HC-Pro"
FT /protein_id="ADG86735.1"
FT /translation="SAAEQFWKGFDETFRSFRTTTTMHERKNNVLDVVQCGEVAGIICQ
FT SLMPCCRITCIQCANEYAMKSAEEVRTHIENTLNKGISGIQQRYPNFPHTIALLETYKT
FT MLNSVNTNREACGKVHFLIGDRTEQPFSHVLRVNEVLIKGNRATSSELNMASNELLEVA
FT RYLRNRTDNIKKGSLATFRNKVSAKAHINPSLMCDNQLDANGNFVWGKRGYHAKRFFAN
FT YFDVIQPADGYDKFIIRKFPNGSRKLAIQNLILPRNLDTLMKQLEGESIELQPLTQSCI
FT SKRHERNIYPCCCVTLEDGTPEYSEFKAPTKNHIVLGNSGDSKYLDMPADISENLYIAK
FT EGYCYINIFLAMLVNVDEKDAKDYTKWVRDVVTEQLKEWPTMIQVALACYQLSVLFPSV
FT KSAELPRILVDHKTQTMHVIDSYGSATTGYHILKANTVSQLEKFASDTLESEMKHYRVG
FT "
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SQ Sequence 1374 BP; 452 A; 260 C; 303 G; 359 T; 0 other;
gu904124 Length: 1374 31-MAY-2011 Type: N Check: 1664 ..
1 tcagcggcgg agcaattctg gaaaggtttt gatgaaacat ttagaagttt
51 tcgaaccaca acaacgatgc atgaacggaa aaacaatgtc ctcgatgttg
101 tgcagtgtgg ggaggtggct ggcattatat gtcaatcttt aatgccttgt
151 tgcagaataa catgcattca atgcgcaaat gaatatgcaa tgaagagtgc
201 ggaggaagtt cgaacccaca ttgagaacac actcaataag ggcatcagtg
251 ggatccaaca gagataccca aattttccac acacaatagc actccttgag
301 acatacaaga ctatgctcaa ttctgtaaat acaaacagag aagcttgtgg
351 aaaggttcat tttctaattg gtgatcgtac agaacaacct ttttctcatg
401 ttctccgagt gaatgaggtt ttgatcaaag ggaacagagc cactagttct
451 gaattgaata tggcatctaa cgaactttta gaagtggcta gatacttgag
501 gaacaggact gacaatatta agaagggttc gcttgcaacg ttccgaaata
551 aagtttcggc aaaagctcac atcaacccct ctttaatgtg tgataaccaa
601 ttggatgcaa atggcaattt cgtttggggc aaacgaggtt atcatgcaaa
651 gcgtttcttt gcaaactatt ttgatgtcat tcaaccggct gatgggtatg
701 acaagttcat tattcggaaa tttccgaatg gctcccggaa gttagcaata
751 caaaacttga tcctcccgcg gaatttggat acgctgatga aacaacttga
801 aggggagagc atagagttac aaccgctaac ccaaagttgc ataagcaagc
851 ggcatgaacg gaacatttat ccttgctgtt gtgtaacact ggaagatgga
901 acgcctgaat attcagaatt taaggcaccg actaaaaacc acatagtcct
951 tgggaactca ggagactcca aatatcttga tatgccagcc gatatcagtg
1001 aaaatttgta tatcgcaaaa gaaggatact gttatatcaa catatttttg
1051 gccatgctcg tgaatgttga tgaaaaagat gctaaggact acacaaagtg
1101 ggtgcgcgat gtagtcactg aacaattaaa ggaatggcca acaatgatcc
1151 aggttgcact tgcatgttat cagctatcag tgctatttcc atcagtcaaa
1201 tcagcagaat tgccgagaat tttggtggat cataaaactc aaaccatgca
1251 tgtaattgat tcgtatggct cagctaccac aggatatcac attctgaagg
1301 caaacacagt tagtcaacta gaaaagtttg caagtgatac actcgagtca
1351 gaaatgaagc attatagagt tggt