Sequence of DPV Tobacco vein banding mosaic virus

Tobacco vein banding mosaic virus isolate SDWF2 polyprotein gene, partial cds.

ACC No: GU904126

Dated: 2011-05-31 | Length: 1200 | CRC: 1133409536

                
ID   GU904126; SV 1; linear; genomic RNA; STD; VRL; 1200 BP.
XX
AC   GU904126;
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DT   31-MAY-2011 (Rel. 109, Created)
DT   31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE   Tobacco vein banding mosaic virus isolate SDWF2 polyprotein gene, partial
DE   cds.
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KW   .
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OS   Tobacco vein banding mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1200
RX   PUBMED; 21497622.
RA   Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT   "Molecular variability of Tobacco vein banding mosaic virus populations";
RL   Virus Res. 158(1-2):188-198(2011).
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RN   [2]
RP   1-1200
RA   Zhang C., Gao R., Li X.;
RT   ;
RL   Submitted (08-FEB-2010) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1200
FT                   /organism="Tobacco vein banding mosaic virus"
FT                   /host="tobacco"
FT                   /isolate="SDWF2"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:33765"
FT   CDS             <1. .>1200
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADZ93839.1"
FT                   /translation="GLIEDNVGHHAAVKLLIQSVYKPKVLKTLLMEEPYLIVLSIISPS
FT                   VLIALYKSGSLYRAVQMLQNKEPTLRMVISLLTMLATKVSRADDLYSQYQLIQDHAERF
FT                   REVLNNGDKHSISRRLAEQFIEVQIAVAESNHDTESLGFRTTKVKGLALIEKIYQQDLE
FT                   ELWQGLSLLEKCSCILWQLRHRRKLRVELGENGTLDLSKALVTFKQYAQDNFDKVLSPI
FT                   HKRSHYVTDVPMRILRGVRCRVVGTFSYLFSDLFRFVQVLAILSVLLAIFNNIYAFTCQ
FT                   YREFKMIEASREEEKKLESLDKLYAHLSYKLGEKPTFEEFHQFVSACNPQLVEFLEVSY
FT                   APVVEHQAVKRASEARLEQIVAFIALVMMIFDNDRSDCVYRVLNKFKNIVGIANQEVIH
FT                   Q"
FT   mat_peptide     1. .1041
FT                   /product="P3"
FT   mat_peptide     1042. .1200
FT                   /product="6K1"
XX
SQ   Sequence 1200 BP; 381 A; 201 C; 272 G; 346 T; 0 other;

gu904126 Length: 1200  31-MAY-2011  Type: N  Check: 7348  ..

       1  gggctgattg aagataatgt aggccaccat gcagctgtca aattgctcat
      51  tcaatcagtg tataaaccca aggtcttgaa gacactactg atggaagagc
     101  catatcttat tgttttgagt ataatatcac catcagttct catcgcacta
     151  tacaaaagtg gtagtcttta cagagcagtt caaatgttac aaaataaaga
     201  acccactctt cggatggtaa taagtttgct gaccatgcta gctacaaagg
     251  tttcgagagc agatgatttg tatagccagt accagctaat acaagatcat
     301  gcagagcgct tccgtgaggt tcttaacaat ggggacaaac atagcatttc
     351  gaggcgtctt gcagagcaat ttattgaggt gcaaatcgct gtagctgaat
     401  cgaaccacga tactgaatca cttgggtttc ggacaacaaa ggtgaagggt
     451  ttggcactca ttgaaaaaat ctatcaacag gatctggagg agctttggca
     501  aggtttatca ttgttggaaa agtgctcatg tatactatgg caattaaggc
     551  atcgaagaaa attaagagta gaactgggcg agaacggtac gctagactta
     601  tcgaaagcct tagttacatt caagcaatat gcacaggaca actttgacaa
     651  ggtactgtca cctatacata agcgttcaca ttatgtgacg gatgttccaa
     701  tgcgtatact tagaggagtg agatgtagag tggtgggaac tttttcttat
     751  ctgttttctg atttatttag atttgtacag gttttggcaa ttttaagtgt
     801  gttgttagca atctttaata atatttatgc tttcacatgt caatatagag
     851  agtttaagat gatagaggca tctagggagg aagaaaagaa gttagaaagt
     901  ttggataagc tctatgccca tctaagttac aaacttggag agaaaccaac
     951  attcgaggag tttcaccaat ttgtatctgc ttgcaatcca cagttagttg
    1001  aattcctcga ggttagctat gccccagtag ttgaacacca agctgtgaag
    1051  cgagcgtcgg aagcacgact agaacaaata gttgcattta tagctctggt
    1101  gatgatgatc tttgataatg ataggagtga ttgtgtctat agagttctaa
    1151  acaaattcaa gaacatagtt ggtatcgcaa atcaagaggt gattcatcaa