Sequence of DPV Tobacco vein banding mosaic virus

Tobacco vein banding mosaic virus isolate SDLY3 polyprotein gene, partial cds.

ACC No: GU904140

Dated: 2011-05-31 | Length: 1200 | CRC: 1090495204

                
ID   GU904140; SV 1; linear; genomic RNA; STD; VRL; 1200 BP.
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AC   GU904140;
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DT   31-MAY-2011 (Rel. 109, Created)
DT   31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE   Tobacco vein banding mosaic virus isolate SDLY3 polyprotein gene, partial
DE   cds.
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KW   .
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OS   Tobacco vein banding mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1200
RX   PUBMED; 21497622.
RA   Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT   "Molecular variability of Tobacco vein banding mosaic virus populations";
RL   Virus Res. 158(1-2):188-198(2011).
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RN   [2]
RP   1-1200
RA   Zhang C., Gao R., Li X.;
RT   ;
RL   Submitted (08-FEB-2010) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1200
FT                   /organism="Tobacco vein banding mosaic virus"
FT                   /host="tobacco"
FT                   /isolate="SDLY3"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:33765"
FT   CDS             <1. .>1200
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADZ93853.1"
FT                   /translation="GLIEDNVGHHAAVKLLIQSVYKPKVLRTLLMEEPYLIVLSIISPS
FT                   VLIALYKSGSLYRAVQMLQNKEPTLRMVISLLTMLATKVSRADDLYSQYQLIQDHAERF
FT                   REVLNNGDKHSISRRLAEQFIEVQIAVAESNHDTESLGFRTTKVKGLALIEKIYQQDLE
FT                   ELWQGLSLLGKCSCILWQLRHRRKLRVELGENGTLDLSKALVTFKQYAQDNFDKVLSPI
FT                   HKRSHYVTDVPMRILRGVRCRVVGTFSYLFSDLFRFVQVLAILSVLLAIFNNIYAFTCQ
FT                   YREFKMIEASREEEKKLESLDKLYAHLSYKLGEKPTFEEFHQFVSACNPQLVEFLEASY
FT                   APVVEHQAVKRASEARLEQIVAFIALVMMIFDNDRSDCVYRVLNKFKNIVGIADQEVIH
FT                   Q"
FT   mat_peptide     1. .1041
FT                   /product="P3"
FT   mat_peptide     1042. .1200
FT                   /product="6K1"
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SQ   Sequence 1200 BP; 386 A; 193 C; 267 G; 354 T; 0 other;

gu904140 Length: 1200  31-MAY-2011  Type: N  Check: 9463  ..

       1  gggctgattg aagataatgt aggccaccat gcagctgtta aattgctcat
      51  acagtcagtt tataaaccca aggtcttgag aacactactg atggaagagc
     101  catatctcat tgttttgagt ataatatcac catcagttct tatcgcacta
     151  tataagagtg gtagtcttta cagagcagtc caaatgttac aaaacaaaga
     201  acccactctg cggatggtaa taagtttgct gaccatgcta gctacaaagg
     251  tttcgagagc agatgatttg tatagccagt accagctaat acaagatcat
     301  gcagagcgct ttcgtgaagt tcttaacaat ggggacaaac atagcatttc
     351  gaggcgtctc gcagagcaat ttattgaggt gcaaattgct gtagctgaat
     401  cgaaccatga tactgaatca cttgggtttc ggacaacaaa ggtgaagggt
     451  ttggcactca ttgaaaaaat ctatcaacag gatttggagg agctttggca
     501  aggtttgtca ttgttgggaa agtgctcatg tatactatgg caattaaggc
     551  atcgaagaaa attaagggta gaactgggcg aaaacggtac actagacttg
     601  tcgaaagcct tagttacatt caagcaatat gcacaggaca actttgacaa
     651  ggtactgtct cctatacata agcgttcaca ttacgtgacg gatgttccaa
     701  tgcgtatact tagaggagtg agatgtagag tagtaggaac tttttcttat
     751  ctgttttctg atttatttag atttgtacag gttttggcaa ttttaagtgt
     801  gttattagca atctttaata atatttatgc tttcacatgt caatatagag
     851  agtttaaaat gatagaggca tctagggaag aagagaagaa attagaaagt
     901  ttggataaac tctatgctca tctaagttac aaacttggag aaaaaccaac
     951  atttgaggag tttcatcaat ttgtatctgc ttgcaatcca caattagttg
    1001  agtttctcga agctagttat gccccagtag ttgaacacca ggctgtaaag
    1051  cgagcatcgg aagcacgact agaacaaata gtcgcattta tagctctggt
    1101  gatgatgatc tttgataatg ataggagtga ttgtgtctat agagttttaa
    1151  acaaatttaa gaacatagtt ggtattgcag atcaagaggt gattcatcaa