Sequence of DPV Tobacco vein banding mosaic virus

Tobacco vein banding mosaic virus isolate SX11 polyprotein gene, partial cds.

ACC No: GU904146

Dated: 2011-05-31 | Length: 1200 | CRC: 2015407346

                
ID   GU904146; SV 1; linear; genomic RNA; STD; VRL; 1200 BP.
XX
AC   GU904146;
XX
DT   31-MAY-2011 (Rel. 109, Created)
DT   31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE   Tobacco vein banding mosaic virus isolate SX11 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Tobacco vein banding mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1200
RX   PUBMED; 21497622.
RA   Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT   "Molecular variability of Tobacco vein banding mosaic virus populations";
RL   Virus Res. 158(1-2):188-198(2011).
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RN   [2]
RP   1-1200
RA   Zhang C., Gao R., Li X.;
RT   ;
RL   Submitted (08-FEB-2010) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1200
FT                   /organism="Tobacco vein banding mosaic virus"
FT                   /host="tobacco"
FT                   /isolate="SX11"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:33765"
FT   CDS             <1. .>1200
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADZ93859.1"
FT                   /translation="GLIEDNVGHHAAVKLLIQSVYKPKVLKTLLMEEPYLIVLSIISPS
FT                   VLIALYKSGSLYRAVQMLQNKEPTLRMVISLLTMLATKVSRADDLYSQYQLIQDHAERF
FT                   REVLNNGDKHSISRRLAEQFIEVQIAVAESNHDTESLGFRTTKVKGLALIEKIYQQDLE
FT                   ELWQGLSLLEKCSCILWQLRHRRKLRVELGENGTLDLSKALVTFKQYAQDNFDKVLSPI
FT                   HKRSHYVTDVPMRILRGVRCRVVGTFSYLFSDLFRFVQVLAILSVLLAIFNNIYAFTCQ
FT                   YREFKMIEASREEEKKLESLDKLYAHLSYKLGEKPTFEEFHQFVSACNPQLVEFLEVSY
FT                   APVVEHQAVKRASEARLEQIVAFIALVMMIFDNDRSDCVYRVLNKFKNIVGVADQEVIH
FT                   Q"
FT   mat_peptide     1. .1041
FT                   /product="P3"
FT   mat_peptide     1042. .1200
FT                   /product="6K1"
XX
SQ   Sequence 1200 BP; 390 A; 203 C; 265 G; 342 T; 0 other;

gu904146 Length: 1200  31-MAY-2011  Type: N  Check: 4426  ..

       1  gggctgattg aagataatgt aggccaccat gcagctgtca aactgctcat
      51  acaatcagtg tataaaccca aggtcttgaa aacactactg atggaagagc
     101  catatcttat tgttttgagt ataatatcac catcagttct catcgcacta
     151  tataaaagtg gtagtcttta cagagcagtc caaatgttac aaaacaaaga
     201  acccactctt cggatggtaa taagtttgct gaccatgcta gctacaaagg
     251  tttcgagagc agatgatttg tatagtcaat accaactaat acaagatcat
     301  gcagagcgct tccgtgaggt tctaaacaat ggggacaaac atagcatttc
     351  gaggcgtctc gcagagcaat ttattgaggt gcaaattgct gtagctgaat
     401  cgaaccatga tactgaatca cttgggtttc ggacaacaaa ggtgaagggt
     451  ttggcactca ttgaaaaaat ctatcaacag gatttggagg agctttggca
     501  aggtttatca ttgttggaaa agtgctcatg tatactatgg caattaaggc
     551  atcgaagaaa attaagggta gaactgggcg agaacggtac actagacttg
     601  tcgaaagcct tagttacatt caagcaatat gcacaggaca actttgacaa
     651  ggtactgtca cctatacata agcgttcaca ttatgtgacg gatgttccaa
     701  tgcgtatact cagaggagtg agatgtagag tagtaggaac tttttcttat
     751  ctgttttctg atttatttag atttgtacag gttttggcaa ttttaagtgt
     801  gttattagca atctttaata atatttatgc tttcacatgt caatacagag
     851  agtttaaaat gatagaggca tctagggagg aagaaaagaa gttagaaagt
     901  ttggataagc tctacgccca tctaagttac aaacttggag agaaaccaac
     951  attcgaggag ttccaccaat ttgtatctgc ttgcaatcca cagttagttg
    1001  aattcctcga agttagctat gccccagtag ttgaacacca ggctgtaaag
    1051  cgagcatcgg aagcacgact agaacaaata gttgcattta tagctctggt
    1101  gatgatgatc tttgataatg ataggagtga ttgtgtttat agagttctaa
    1151  acaaattcaa aaacatagtt ggtgtcgcag atcaagaggt gattcatcaa