Sequence of DPV Tobacco vein banding mosaic virus

Tobacco vein banding mosaic virus isolate GSZN18 polyprotein gene, partial cds.

ACC No: GU904151

Dated: 2011-05-31 | Length: 1200 | CRC: -819076621

                
ID   GU904151; SV 1; linear; genomic RNA; STD; VRL; 1200 BP.
XX
AC   GU904151;
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DT   31-MAY-2011 (Rel. 109, Created)
DT   31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE   Tobacco vein banding mosaic virus isolate GSZN18 polyprotein gene, partial
DE   cds.
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KW   .
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OS   Tobacco vein banding mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1200
RX   PUBMED; 21497622.
RA   Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT   "Molecular variability of Tobacco vein banding mosaic virus populations";
RL   Virus Res. 158(1-2):188-198(2011).
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RN   [2]
RP   1-1200
RA   Zhang C., Gao R., Li X.;
RT   ;
RL   Submitted (08-FEB-2010) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1200
FT                   /organism="Tobacco vein banding mosaic virus"
FT                   /host="tobacco"
FT                   /isolate="GSZN18"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:33765"
FT   CDS             <1. .>1200
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADZ93864.1"
FT                   /translation="GLIEDNVGHHAAVKLLIQSVYKPKVLKTLLMEEPYLIVLSIISPS
FT                   VLIALYKSGSLYRAVQMLQNKEPTLRMVISLLTMLATKVSRADDLYSQYQLIQDHAERF
FT                   REVLNNGDKHSISRRLAEQFIEVQISVAESNHDTESLGFRTTKVKGLALIEKIYQQDLE
FT                   ELWQGLSLLEKCSCMLWQLRHRRKLKVELGENGTLDLSKALVTFKQYAQDNFDKVLSPI
FT                   HKRSHYVTNVPMRILRGVRCRVVGTFSYLFSDLFRFVQVLAILSVLLAIFNNIYAFTCQ
FT                   YREFKMIEASREEEKKLESLDKLYAHLSYKLGEKPTFEEFHQFVSACNPQLVEFLEVSY
FT                   APIVEHQAVKRASEARLEQIVAFIALVMMIFDNDRSDCVYRVLNKFKNIVGIADQEVIH
FT                   Q"
FT   mat_peptide     1. .1041
FT                   /product="P3"
FT   mat_peptide     1042. .1200
FT                   /product="6K1"
XX
SQ   Sequence 1200 BP; 384 A; 202 C; 268 G; 346 T; 0 other;

gu904151 Length: 1200  31-MAY-2011  Type: N  Check: 7957  ..

       1  gggctgattg aagataatgt aggccaccat gcagctgtca aattgctcat
      51  tcagtcagtg tataaaccca aggtcttgaa gacactactg atggaagagc
     101  catatcttat tgttttgagt ataatatcac catcagttct catcgcacta
     151  tacaaaagtg gtagtcttta cagagcagtt caaatgttac aaaataaaga
     201  acccactctt cggatggtaa taagtttgct gaccatgcta gctacaaagg
     251  tttcgagagc agatgatttg tatagccagt accagctaat acaagatcat
     301  gcagagcgct tccgtgaggt tcttaataat ggggacaaac atagcatttc
     351  gaggcgtctc gcggagcaat ttattgaggt gcaaatctct gtagctgaat
     401  cgaatcatga tactgaatca cttgggtttc ggacaacaaa ggtgaagggt
     451  ttggcactca ttgaaaaaat ctatcaacag gatttggagg agctttggca
     501  aggtttatca ttgttggaaa agtgctcatg tatgctatgg caattaaggc
     551  atcgaagaaa attaaaggta gaactgggcg agaacggtac gctagacttg
     601  tcgaaagcct tagttacatt caagcaatat gcacaggaca actttgacaa
     651  ggtactgtca cctatacata agcgttcaca ctatgtgaca aatgttccaa
     701  tgcgtatact cagaggagtg agatgtagag tagtaggaac tttttcttac
     751  ctgttttctg atttatttag atttgtacag gttttggcaa ttttgagtgt
     801  attattagca atctttaata atatttatgc ttttacatgt caatatagag
     851  agtttaagat gatagaggca tctagggaag aagagaagaa attagaaagt
     901  ttggataagc tctatgccca tctaagctac aaacttggag agaaaccaac
     951  attcgaggag tttcaccaat ttgtatctgc ctgcaatcca cagttagttg
    1001  aattcctcga ggttagctat gccccaatag ttgaacacca ggctgtaaag
    1051  cgagcatcgg aagcacgact agaacaaata gttgcattta tagctctggt
    1101  gatgatgatc tttgacaatg ataggagtga ttgtgtctat agagttctaa
    1151  acaaattcaa gaacatagtt ggtattgcag atcaagaggt gattcatcaa