Sequence of DPV Tobacco vein banding mosaic virus

Tobacco vein banding mosaic virus isolate GSZN24 polyprotein gene, partial cds.

ACC No: GU904153

Dated: 2011-05-31 | Length: 1200 | CRC: -1594135262

                
ID   GU904153; SV 1; linear; genomic RNA; STD; VRL; 1200 BP.
XX
AC   GU904153;
XX
DT   31-MAY-2011 (Rel. 109, Created)
DT   31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE   Tobacco vein banding mosaic virus isolate GSZN24 polyprotein gene, partial
DE   cds.
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KW   .
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OS   Tobacco vein banding mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1200
RX   PUBMED; 21497622.
RA   Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT   "Molecular variability of Tobacco vein banding mosaic virus populations";
RL   Virus Res. 158(1-2):188-198(2011).
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RN   [2]
RP   1-1200
RA   Zhang C., Gao R., Li X.;
RT   ;
RL   Submitted (08-FEB-2010) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1200
FT                   /organism="Tobacco vein banding mosaic virus"
FT                   /host="tobacco"
FT                   /isolate="GSZN24"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:33765"
FT   CDS             <1. .>1200
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADZ93866.1"
FT                   /translation="GLIEDNVGHHAAVKLLVQSVYKPKVLKTLLTEEPYLIVLSIISPS
FT                   VLIALYKSGSLYRAVQMLQNKEPTLRMVISLLTMLATKVSRADDLYSQYQLIQDHAERF
FT                   REVLNNGDKHSISRRLAEQFIEVQIAVAESNHDTESLGFRTTKVKGLALIEKIYQQDLE
FT                   ELWQGLSLLEKCSCILWQLRHRRKLKVELGENGTLDLSKALVTFKQYAQDNFDKVLSPI
FT                   HKRSHYVTDVPMRILRGVRCRVVGTFSYLFSDLFRFVQVLAILSVLLAIFNNIYALTCQ
FT                   YREFKMIEASREEEKKLESLDKLYAHLSYKLGEKPTFEEFHQFVSACNPQLVEFLEVSY
FT                   APVVEHQAVKRASEARLEQIVAFIALVMMIFDNDRSDCVYRVLNKFKNIVGIADQEVIH
FT                   Q"
FT   mat_peptide     1. .1041
FT                   /product="P3"
FT   mat_peptide     1042. .1200
FT                   /product="6K1"
XX
SQ   Sequence 1200 BP; 388 A; 200 C; 265 G; 347 T; 0 other;

gu904153 Length: 1200  31-MAY-2011  Type: N  Check: 5391  ..

       1  gggctgattg aagataatgt aggccaccat gcagctgtca aattgctcgt
      51  acaatcagtg tataaaccca aggtcttgaa aacactactg acggaagagc
     101  catatcttat tgttttgagt ataatatcac catcagttct catcgcacta
     151  tataaaagtg gtagtcttta cagagcagtc caaatgttac aaaacaaaga
     201  acccactctt cggatggtaa taagtttgct gaccatgcta gctacaaagg
     251  tttcgagagc agatgatttg tatagccagt accagctaat acaagatcat
     301  gcagagcgct tccgtgaggt tcttaacaat ggggacaaac atagcatttc
     351  gcggcgtctc gcagagcaat ttattgaggt gcaaattgct gtagctgaat
     401  cgaaccacga tactgaatca cttggatttc ggacaacaaa ggtgaagggc
     451  ttagcactca ttgaaaaaat ctatcaacag gatttggagg agctctggca
     501  aggtttatca ttgttggaaa agtgctcatg tatactatgg caattaaggc
     551  atcgaagaaa attaaaggta gaactgggcg agaacggtac gttagacttg
     601  tcgaaagcct tagttacatt caagcaatat gcacaggaca actttgacaa
     651  ggtactgtca cctatacata agcgttcaca ctatgtgacg gatgttccga
     701  tgcgtatact tagaggagtg agatgtagag tagtaggaac tttttcttat
     751  ctgttttctg atttatttag atttgtacag gttttggcaa ttttaagcgt
     801  gttattagca atttttaata atatttatgc tctcacatgt caatataggg
     851  agtttaagat gatagaagca tctagggaag aagagaagaa attagaaagt
     901  ttggataaac tctatgctca tctaagttac aaacttggag aaaagccaac
     951  atttgaggag tttcatcaat ttgtatctgc ttgcaatcca caattagttg
    1001  aatttctcga agttagttat gccccagtag ttgaacacca ggctgtaaag
    1051  cgagcatcgg aagcacgact agaacaaata gtcgcattta tagctctggt
    1101  gatgatgatc tttgataatg ataggagtga ttgtgtttat agagttttaa
    1151  acaaattcaa gaacatagtt ggtatcgcag atcaagaggt gattcatcaa