Sequence of DPV Tobacco vein banding mosaic virus

Tobacco vein banding mosaic virus isolate YN11 polyprotein gene, partial cds.

ACC No: GU904163

Dated: 2011-05-31 | Length: 1200 | CRC: 682962543

                
ID   GU904163; SV 1; linear; genomic RNA; STD; VRL; 1200 BP.
XX
AC   GU904163;
XX
DT   31-MAY-2011 (Rel. 109, Created)
DT   31-MAY-2011 (Rel. 109, Last updated, Version 1)
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DE   Tobacco vein banding mosaic virus isolate YN11 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Tobacco vein banding mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1200
RX   PUBMED; 21497622.
RA   Zhang C.L., Gao R., Wang J., Zhang G.M., Li X.D., Liu H.T.;
RT   "Molecular variability of Tobacco vein banding mosaic virus populations";
RL   Virus Res. 158(1-2):188-198(2011).
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RN   [2]
RP   1-1200
RA   Zhang C., Gao R., Li X.;
RT   ;
RL   Submitted (08-FEB-2010) to the INSDC.
RL   Department of Plant Pathology, Shandong Agricultural University, No. 61,
RL   Daizong Street, Tai'an, Shandong 271018, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1200
FT                   /organism="Tobacco vein banding mosaic virus"
FT                   /host="tobacco"
FT                   /isolate="YN11"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:33765"
FT   CDS             <1. .>1200
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADZ93875.1"
FT                   /translation="GLIEDNVGHHAAVKLLIQSVYKPKVLKTLLMEEPYLIVLSIISPS
FT                   VLIALYKSGSLYRAIQMLHNKEPTLRMVVSLLTMLATKVSRADDMYSQYRLIQDHAERF
FT                   REVLNSGDKYSISRRLAEQFIEVQIAVAESNHDTESLGFRTTKLKGLALIEKIYQQDLE
FT                   ELWQGLPLLEKCSCILWQLRHRRKLQVELGENGTQDLSKALITFKRYAQDNFDKILSPI
FT                   QKRSHYVTDVPMRVLRGMRCKVVGTFSYLFSDLFRFVQVLAILSVLLAIFNNIYAFTCQ
FT                   YREFKMMEASREEEKKLESLDKLYAHLSYKLGEKPTFEEFRQFVSACNPQLVEFLEVNY
FT                   APIVEHQAVKRESEVRLEQIVAFIALVMMIFDNDRSDCVYRVLNKFKNIVGVADQEVIH
FT                   Q"
FT   mat_peptide     1. .1041
FT                   /product="P3"
FT   mat_peptide     1042. .1200
FT                   /product="6K1"
XX
SQ   Sequence 1200 BP; 381 A; 191 C; 272 G; 356 T; 0 other;

gu904163 Length: 1200  31-MAY-2011  Type: N  Check: 5164  ..

       1  gggctgattg aagataatgt gggccaccat gcagctgtca aattgcttat
      51  acagtcagtg tataaaccca aagtcttaaa gacactactg atggaggagc
     101  catatcttat tgttttgagc ataatatctc catcagttct cattgcacta
     151  tataaaagtg gtagtcttta cagagcaatt caaatgttac acaataaaga
     201  acccactctt cggatggtag tgagtttgtt gaccatgcta gctacaaagg
     251  tctcaagagc agatgatatg tatagtcagt atcggctaat acaagatcac
     301  gcagagcgct tccgcgaggt tttaaatagt ggggacaagt atagcatttc
     351  aagacgtctt gcagagcagt ttattgaggt gcaaattgct gtagccgaat
     401  cgaaccatga cactgaatca cttgggtttc gaacaacaaa gttaaagggt
     451  ttggcactca ttgaaaaaat ctatcaacag gatttggagg agctttggca
     501  aggtttacca ttgttggaaa agtgctcatg tatactatgg caattaaggc
     551  atcgaagaaa attacaggta gaactgggcg agaacggtac gcaagactta
     601  tcgaaagcct tgattacatt caagcgatat gcacaggaca actttgataa
     651  gatactttca cctatacaga agcgttcaca ttatgtgacg gatgtcccaa
     701  tgcgtgtgct cagaggaatg agatgtaaag tagtaggaac tttttcttat
     751  ttgttttctg atttatttag atttgtacag gttttggcaa ttttaagtgt
     801  cttattagca atttttaata atatttatgc tttcacatgt caatataggg
     851  agtttaagat gatggaagca tcgagggaag aagagaagaa gttggaaagt
     901  ttggacaaac tttatgccca tctgagctac aaacttggag agaaaccaac
     951  atttgaggag tttcgccaat ttgtatctgc ttgcaatcca cagttggttg
    1001  aatttctcga agttaattat gctccaatag ttgaacacca ggctgtaaag
    1051  cgagaatcgg aagtacgact tgaacaaata gtcgcattta tagctctagt
    1101  gatgatgatc tttgacaatg ataggagtga ttgtgtttat agggttttaa
    1151  ataagttcaa gaacatagtt ggtgttgcag atcaagaggt gattcatcaa