Sequence of DPV Plum pox virus

Plum pox virus isolate IT-ERRA-SH754/07 polyprotein gene, partial cds.

ACC No: GU905072

Dated: 2010-04-27 | Length: 594 | CRC: -1122632714

                
ID   GU905072; SV 1; linear; genomic RNA; STD; VRL; 594 BP.
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AC   GU905072;
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DT   27-APR-2010 (Rel. 104, Created)
DT   27-APR-2010 (Rel. 104, Last updated, Version 1)
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DE   Plum pox virus isolate IT-ERRA-SH754/07 polyprotein gene, partial cds.
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KW   .
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OS   Plum pox virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-594
RA   Grillini P., Babini A.R., Fini P., Vicchi V.;
RT   "Recombinant plum pox virus isolates recovered in Emilia-Romagna region
RT   (Italy)";
RL   Unpublished.
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RN   [2]
RP   1-594
RA   Grillini P., Dall'Olio R., Fini P., Vicchi V., Zuppicich M.;
RT   ;
RL   Submitted (23-FEB-2010) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection Service, Emilia-Romagna Region, Via di Corticella, 133,
RL   Bologna, BO 40128, Italy
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FH   Key             Location/Qualifiers
FH
FT   source          1. .594
FT                   /organism="Plum pox virus"
FT                   /host="Prunus domestica cv. Grossa di Felisio"
FT                   /strain="PPV-REC"
FT                   /isolate="IT-ERRA-SH754/07"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy:Emilia Romagna (RA)"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:12211"
FT   CDS             <1. .>594
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="encodes P3 and 6K1 protein"
FT                   /protein_id="ADF42931.1"
FT                   /translation="YXRLRNVVRRKRDDVVCYTHQSMGKLFCKAIGISTSFLPSTLKML
FT                   DMLIVFGLLLSIGATCNSMINEHKHLKQLAADREDKKRFKRLQVLYTRLSEKVGCTPTA
FT                   DEFLEYVGGENPDLLKHAEDLIGDGQVVVHQSKRDSQANLERVVAFVALVMMLFDSERS
FT                   DGVYKILNKLKGIMGSVDQAVHHQSLDDIEDILDE"
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SQ   Sequence 594 BP; 182 A; 115 C; 146 G; 150 T; 1 other;

gu905072 Length: 594  27-APR-2010  Type: N  Check: 6697  ..

       1  tacnaacgcc tgcgaaacgt agtccgccgg aaaagagacg atgtggtttg
      51  ctatacacac cagtcgatgg ggaagctatt ttgcaaagcc atcggaattt
     101  ccacaagttt tcttccaagc actcttaaaa tgcttgacat gctcatcgtg
     151  ttcggtctct tgctttcaat aggagccaca tgtaactcaa tgatcaatga
     201  gcataaacat ctcaagcaac ttgccgccga tcgggaagat aagaaaaggt
     251  tcaaaagatt gcaagtctta tacacaagat tatcagagaa ggttggttgc
     301  acaccaacag cagatgaatt cctggagtat gtgggaggtg aaaaccctga
     351  cttactgaaa catgcagagg atctaattgg ggatggtcaa gttgttgttc
     401  atcaaagcaa gagagactca caagcaaatt tggaacgggt tgtagcattt
     451  gtagctcttg ttatgatgct gtttgactcg gagcgaagtg acggcgtgta
     501  caagattctc aataaactca aaggcatcat ggggagtgtc gaccaggctg
     551  ttcatcatca gagcttggac gatatagaag atatactgga tgag