Sequence of DPV Narcissus late season yellows virus

Narcissus late season yellows virus isolate WA-2 polyprotein gene, partial cds.

ACC No: GU905150

Dated: 2010-07-23 | Length: 981 | CRC: -710485002

                
ID   GU905150; SV 1; linear; genomic RNA; STD; VRL; 981 BP.
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AC   GU905150;
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DT   13-JUL-2010 (Rel. 105, Created)
DT   23-JUL-2010 (Rel. 105, Last updated, Version 2)
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DE   Narcissus late season yellows virus isolate WA-2 polyprotein gene, partial
DE   cds.
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KW   .
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OS   Narcissus late season yellows virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-981
RX   PUBMED; 20480194.
RA   Wylie S.J., Nouri S., Coutts B.A., Jones M.G.;
RT   "Narcissus late season yellows virus and Vallota speciosa virus found
RT   infecting domestic and wild populations of Narcissus species in Australia";
RL   Arch. Virol. 155(7):1171-1174(2010).
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RN   [2]
RP   1-981
RA   Wylie S.J.;
RT   ;
RL   Submitted (22-FEB-2010) to the EMBL/GenBank/DDBJ databases.
RL   State Agricultural Biotechnology Centre, Murdoch University, South Street,
RL   Perth, WA 6150, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .981
FT                   /organism="Narcissus late season yellows virus"
FT                   /host="Narcissus sp."
FT                   /isolate="WA-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collection_date="Aug-2008"
FT                   /db_xref="taxon:160842"
FT   CDS             <1. .937
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /protein_id="ADJ95789.1"
FT                   /translation="LRKLYLNKNAEQSDIMRYVEAILEDFDDETPLEVYHQSGKQTLDA
FT                   GVEEERNNPKGKEKRATDESSGKPPSTNRDKDVNVGVSGNFPVPRLKMITRKLTLPLYN
FT                   KRIALNLDHLITYTPRQVDLSNTRATQRQFDTWYEGVMADYDVDEAKMAIILNGFMVWC
FT                   IENGTSPNINGVWVMMDGEEQVEFPLKPVLEHAKPTLRQIMAHFSNGAEAYIEMRNYQQ
FT                   PYMPRYGLQRNLTDMSLARFAFDFYEMTSKTPIRAREAHLQMKAAALRGTQNHLFGLDG
FT                   NVGTTEENTERHTTDDVNRNMHSLLGVRGV"
FT   mat_peptide     <1. .112
FT                   /product="NIb replicase"
FT   mat_peptide     113. .934
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           938. .>981
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SQ   Sequence 981 BP; 328 A; 195 C; 236 G; 221 T; 1 other;

gu905150 Length: 981  23-JUL-2010  Type: N  Check: 4971  ..

       1  tttgagaaag ttatatttaa ataagaacgc tgagcagagt gatattatgc
      51  gttatgtgga agcaattttg gaagattttg acgatgaaac gccacttgaa
     101  gtctatcacc agtcaggcaa gcaaactctg gatgccggtg ttgaggagga
     151  gcgaaataac cccaagggca aagagaagag agcaaccgat gaatcaagtg
     201  ggaaaccccc atccacgaac agagataaag atgtgaacgt tggtgtcagt
     251  ggcaacttcc cagtgccacg actgaaaatg ataacacgta agttgacatt
     301  gccattgtac aacaagcgca tagctcttaa tctagaccat ctcatcacat
     351  acacaccacg acaggtggac ttatcaaaca caagagccac acaaaggcaa
     401  ttcgatacat ggtacgaagg ggtcatggcg gattatgatg tcgatgaagc
     451  gaaaatggca attatactta acggatttat ggtgtggtgt attgagaatg
     501  gaacatcacc gaacatcaat ggagtgtggg ttatgatgga cggagaggaa
     551  caagttgaat ttcctctaaa accagtcctt gaacacgcca aaccaacact
     601  caggcaaata atggcccatt tcagtaacgg tgctgaagcg tatattgaga
     651  tgagaaacta ccaacagccg tacatgccac ggtacggcct gcagcgaaat
     701  ttaaccgaca tgagcctggc acgctttgct tttgatttct atgagatgac
     751  ttcaaaaaca ccaatccgag cacgagaagc acacctgcag atgaaagcag
     801  cagctcttcg gggcacgcag aatcatttat ttggcttgga tggaaatgtt
     851  ggtacaacag aagagaacac ggagagacac accaccgacg atgtaaatag
     901  gaatatgcat agccttctag gcgtaagrgg cgtgtaatat tgtgtgttgg
     951  tatttatagc aaaatatata aatactcgtt a