Sequence of DPV Narcissus late season yellows virus

Narcissus late season yellows virus isolate WA-4 coat protein gene, partial cds.

ACC No: GU905152

Dated: 2010-07-23 | Length: 875 | CRC: 78881525

                
ID   GU905152; SV 1; linear; genomic RNA; STD; VRL; 875 BP.
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AC   GU905152;
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DT   13-JUL-2010 (Rel. 105, Created)
DT   23-JUL-2010 (Rel. 105, Last updated, Version 2)
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DE   Narcissus late season yellows virus isolate WA-4 coat protein gene, partial
DE   cds.
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KW   .
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OS   Narcissus late season yellows virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-875
RX   PUBMED; 20480194.
RA   Wylie S.J., Nouri S., Coutts B.A., Jones M.G.;
RT   "Narcissus late season yellows virus and Vallota speciosa virus found
RT   infecting domestic and wild populations of Narcissus species in Australia";
RL   Arch. Virol. 155(7):1171-1174(2010).
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RN   [2]
RP   1-875
RA   Wylie S.J.;
RT   ;
RL   Submitted (22-FEB-2010) to the EMBL/GenBank/DDBJ databases.
RL   State Agricultural Biotechnology Centre, Murdoch University, South Street,
RL   Perth, WA 6150, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .875
FT                   /organism="Narcissus late season yellows virus"
FT                   /host="Narcissus sp."
FT                   /isolate="WA-4"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collection_date="Aug-2008"
FT                   /db_xref="taxon:160842"
FT   CDS             <1. .825
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="CP"
FT                   /protein_id="ADJ95791.1"
FT                   /translation="SGKQTLDAGVEEERNNPKGKEKRATDESSGKPPSTNRDKDVNVGV
FT                   SGNFPVPRLKMITRKLTLPLYNKRIALNLDHLITYTPRQVDLSNTRATQRQFDTWYEGV
FT                   LADYDVDEAKMAIILNGFMVWCIENGTSPNINGVWVMMDGEEQVEFPLKPVIEHAKPTL
FT                   RQIMAHFSNGAEAYIEMRNYQQPYMPRYGLQRNLTDMSLARFAFDFYEMTSKTPIRARE
FT                   AHLQMKAAALRGTQNHLFGLDGNVGTTEENTERHTTDDVNRNMHSLLGVRGV"
FT   3'UTR           826. .875
XX
SQ   Sequence 875 BP; 291 A; 181 C; 210 G; 191 T; 2 other;

gu905152 Length: 875  23-JUL-2010  Type: N  Check: 9917  ..

       1  tcaggcaagc aaactctgga tgccggtgtt gaggaggagc gaaataaccc
      51  caagggcaaa gagaagagag caaccgatga atcaagtggg aaacccccat
     101  ccacgaacag agataaagat gtgaacgttg gtgtcagtgg caacttccca
     151  gtgccacgac tgaaaatgat aacacgtaag ttgacattgc cattgtacaa
     201  caagcgcata gctcttaatc tagaccatct catcacatac acaccacgac
     251  aggtggactt atcaaacaca agagccacac aaaggcaatt cgatacatgg
     301  tacgaagggg tcttggcgga ttatgatgtc gatgaagcga aaatggcaat
     351  tatacttaac ggatttatgg tgtggtgtat tgagaatgga acatcaccra
     401  acatcaatgg agtgtgggtt atgatggacg gagaggaaca agttgaattt
     451  cctctaaaac cagtcattga acacgccaaa ccaacactca ggcaaataat
     501  ggcccatttc agtaacggtg ctgaagcgta tattgagatg agaaactacc
     551  aacagccgta catgccacgg tacggcctgc agcgaaattt aaccgacatg
     601  agcctggcac gctttgcttt tgatttctat gagatgactt caaaaacacc
     651  aatccgagca cgagaagcac acctgcagat gaaagcagca gctcttcggg
     701  gcacgcagaa tcatttattt ggcttggatg gaaatgttgg tacaacagaa
     751  gagaacacgg agagacacac caccgacgat gtaaatagga atatgcatag
     801  ccttctaggc gtaagrggcg tgtaatattg tgtgttggta tttatagcaa
     851  aatatataaa tactcgttag tattc