Sequence of DPV Narcissus late season yellows virus

Narcissus late season yellows virus isolate WA-7 polyprotein gene, partial cds.

ACC No: GU905155

Dated: 2010-07-23 | Length: 1041 | CRC: 563291323

                
ID   GU905155; SV 1; linear; genomic RNA; STD; VRL; 1041 BP.
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AC   GU905155;
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DT   13-JUL-2010 (Rel. 105, Created)
DT   23-JUL-2010 (Rel. 105, Last updated, Version 2)
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DE   Narcissus late season yellows virus isolate WA-7 polyprotein gene, partial
DE   cds.
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KW   .
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OS   Narcissus late season yellows virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-1041
RX   PUBMED; 20480194.
RA   Wylie S.J., Nouri S., Coutts B.A., Jones M.G.;
RT   "Narcissus late season yellows virus and Vallota speciosa virus found
RT   infecting domestic and wild populations of Narcissus species in Australia";
RL   Arch. Virol. 155(7):1171-1174(2010).
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RN   [2]
RP   1-1041
RA   Wylie S.J.;
RT   ;
RL   Submitted (22-FEB-2010) to the EMBL/GenBank/DDBJ databases.
RL   State Agricultural Biotechnology Centre, Murdoch University, South Street,
RL   Perth, WA 6150, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1041
FT                   /organism="Narcissus late season yellows virus"
FT                   /host="Narcissus tazetta"
FT                   /isolate="WA-7"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collection_date="Sep-2009"
FT                   /db_xref="taxon:160842"
FT   CDS             <1. .985
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /protein_id="ADJ95794.1"
FT                   /translation="SGLAQEGKAPYMAETALRKLYLNKDAEQSDILRYMEAILEDFDDR
FT                   TPLEVYHQSGKQTLDAGVEEERNNPKGKEKRTIDESGVRPPSTNKDKDVNVGVICQFPV
FT                   PRLKMITRKLTLPLYNKRIALNLDHLITYTPRQVDLSNTRATQRQFDTWYEGVMADYDV
FT                   DEAKMAIILNGFMVWCIENGTSPNINGVWVMMDGEEQVEFPLKPIIEHAKPTLRQIMAH
FT                   FSNGXEAYIEMRNYQQPYMPRYGLQRNLTDMSLARFAFDFYEMTSKTPIRAREAHLQMK
FT                   AAALRGTQNHLFGLDGNVGTTEENTERHTTDDVNRNMHSLLGVRGV"
FT   mat_peptide     <1. .160
FT                   /product="NIb replicase"
FT   mat_peptide     161. .982
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           986. .>1041
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SQ   Sequence 1041 BP; 352 A; 207 C; 250 G; 231 T; 1 other;

gu905155 Length: 1041  23-JUL-2010  Type: N  Check: 6211  ..

       1  aagcggttta gctcaggagg gaaaagcacc atacatggca gaaacggctc
      51  tgagaaagtt atacttgaat aaagatgccg aacagagcga tattttgcgt
     101  tacatggaag caattttgga agattttgac gacagaacgc cacttgaagt
     151  ctatcaccag tcgggcaagc aaactctgga tgccggtgtc gaagaggagc
     201  gaaacaaccc caaaggcaag gagaagagaa caatcgacga gtcaggtgtg
     251  agacctccat ccacaaataa agataaagac gtaaatgttg gtgtcatttg
     301  ccagtttcca gtgccacgac tgaaaatgat aacgcgcaag ttgacactgc
     351  cattgtataa caagcgcata gctctgaacc tagaccatct tatcacatac
     401  acaccacgac aagtggactt gtcgaataca agggcaacgc aaaggcaatt
     451  cgacacatgg tacgaaggag ttatggcgga ctatgatgtc gatgaagcaa
     501  agatggcaat catacttaat ggatttatgg tgtggtgtat cgaaaatgga
     551  acatcaccaa acatcaatgg agtgtgggtt atgatggatg gggaagaaca
     601  ggtggaattt cctttaaaac caatcattga acacgccaaa ccaacactca
     651  ggcaaataat ggcccatttc agtaacggtg ytgaagcgta tattgagatg
     701  agaaactacc aacaaccgta catgccacgg tacggcctgc agcgaaactt
     751  aaccgacatg agcctggcac gctttgcttt tgatttctat gaaatgactt
     801  caaaaacacc aatccgagca cgagaggcac acttgcaaat gaaagcagca
     851  gctcttcggg gcacgcagaa tcatttattt ggcttggatg gaaatgttgg
     901  tacaacagaa gagaacacgg agagacacac taccgatgat gtaaatagga
     951  atatgcacag cctcttaggc gtgagaggtg tgtaatattg tgtgttggta
    1001  tttatagcaa aatatataaa tactcgttag tattctcaac a