Sequence of DPV Narcissus late season yellows virus

Narcissus late season yellows virus isolate WA-8 polyprotein gene, partial cds.

ACC No: GU905156

Dated: 2010-07-23 | Length: 894 | CRC: 647046232

                
ID   GU905156; SV 1; linear; genomic RNA; STD; VRL; 894 BP.
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AC   GU905156;
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DT   13-JUL-2010 (Rel. 105, Created)
DT   23-JUL-2010 (Rel. 105, Last updated, Version 2)
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DE   Narcissus late season yellows virus isolate WA-8 polyprotein gene, partial
DE   cds.
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KW   .
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OS   Narcissus late season yellows virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
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RN   [1]
RP   1-894
RX   PUBMED; 20480194.
RA   Wylie S.J., Nouri S., Coutts B.A., Jones M.G.;
RT   "Narcissus late season yellows virus and Vallota speciosa virus found
RT   infecting domestic and wild populations of Narcissus species in Australia";
RL   Arch. Virol. 155(7):1171-1174(2010).
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RN   [2]
RP   1-894
RA   Wylie S.J.;
RT   ;
RL   Submitted (22-FEB-2010) to the EMBL/GenBank/DDBJ databases.
RL   State Agricultural Biotechnology Centre, Murdoch University, South Street,
RL   Perth, WA 6150, Australia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .894
FT                   /organism="Narcissus late season yellows virus"
FT                   /host="Narcissus sp."
FT                   /isolate="WA-8"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /collection_date="Jul-2008"
FT                   /db_xref="taxon:160842"
FT   CDS             <1. .843
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="ADJ95795.1"
FT                   /translation="LEVYHQSGKQTLDAGVEEERNNPKGKEKRATDESSGKPPSTNRDK
FT                   DVNVGVSGNFPVPRLKMITRKLTLPLYNKRIALNLDHLITYTPRQVDLSNTRATQRQFD
FT                   TWYEGVMTDYDVDEAKMAIILNGFMVWCIENGTSPNINGVWVMMDGEEQVEFPLKPVIE
FT                   HAKPTLRQIMAHFSNGAEAYIEMRNYQQPYMPRYGLQRNLTDMSLARFAFDFYEMTSKT
FT                   PIRAREAHLQMKAAALRGTQNHLFGLDGNVGTTEENTERHTTDDINRNMHSLLGVRGV"
FT   mat_peptide     <1. .18
FT                   /product="NIb replicase"
FT   mat_peptide     19. .840
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           844. .>894
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SQ   Sequence 894 BP; 300 A; 187 C; 212 G; 195 T; 0 other;

gu905156 Length: 894  23-JUL-2010  Type: N  Check: 6313  ..

       1  cttgaagtct atcaccagtc aggcaagcaa actctggatg ccggtgttga
      51  ggaggagcga aataacccca agggcaaaga gaagagagca accgatgaat
     101  caagtgggaa acccccatcc acgaacagag ataaagatgt gaacgttggt
     151  gtcagtggca acttcccagt gccacgactg aaaatgataa cacgtaagtt
     201  gacattgccg ttgtacaaca agcgcatagc tcttaatcta gaccatctca
     251  tcacatacac accacgacag gtggacttat caaacacaag agccacacaa
     301  aggcaattcg atacatggta cgaaggggtt atgacggatt atgatgtcga
     351  tgaagcgaaa atggcaatta tacttaacgg atttatggtg tggtgtatcg
     401  agaatggaac atcaccaaac atcaatggag tgtgggttat gatggacgga
     451  gaggaacaag ttgaatttcc tctaaaacca gtcattgaac acgccaaacc
     501  aacactcagg caaataatgg cccatttcag taacggtgct gaagcgtata
     551  ttgagatgag aaactaccaa caaccgtaca tgccacggta cggcctgcag
     601  cgaaatttaa ccgacatgag cctggcacgc tttgcttttg atttctatga
     651  gatgacttca aaaacaccaa tccgagcacg agaagcacac ctgcagatga
     701  aagcagcagc tcttcggggc acgcagaatc atttatttgg cttggatgga
     751  aatgttggta caacagaaga gaacacggag agacacacca ccgacgatat
     801  aaataggaat atgcatagcc ttctaggcgt aaggggcgtg taatattgtg
     851  tgttggtatt tatagcaaaa tatataaata ctcgttagta tctc