Sequence of DPV Cotton leaf curl Gezira virus
Cotton leaf curl Gezira virus-[Hollyhock/Jordan] segment A, complete sequence.
ACC No: GU945265
Dated: 2010-05-03 | Length: 2764 | CRC: -1769107353
ID GU945265; SV 1; circular; genomic DNA; STD; VRL; 2764 BP.
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AC GU945265;
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DT 03-MAY-2010 (Rel. 104, Created)
DT 03-MAY-2010 (Rel. 104, Last updated, Version 1)
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DE Cotton leaf curl Gezira virus-[Hollyhock/Jordan] segment A, complete
DE sequence.
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KW .
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OS Cotton leaf curl Gezira virus-[Hollyhock/Jordan]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2764
RA Anfoka G.H., Haj Ahmad F.W.;
RT ;
RL Submitted (01-MAR-2010) to the EMBL/GenBank/DDBJ databases.
RL Faculty of Agricultural Technology, Biotechnology Department, Balqa'
RL Applied University, Al-Salt 19117, Jordan
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FH Key Location/Qualifiers
FH
FT source 1. .2764
FT /organism="Cotton leaf curl Gezira
FT virus-[Hollyhock/Jordan]"
FT /segment="A"
FT /host="hollyhock"
FT /isolate="Hollyhock/Jordan"
FT /mol_type="genomic DNA"
FT /country="Jordan"
FT /collection_date="May-2009"
FT /db_xref="taxon:756757"
FT gene 163. .531
FT /gene="V2"
FT CDS 163. .531
FT /codon_start=1
FT /gene="V2"
FT /product="V2 protein"
FT /protein_id="ADF56036.1"
FT /translation="MWDPLLNDFPESVHGFRCMLAVKYLQAVRETYDPSTLGYDLLSDL
FT IGVVRRTNYVEATSRYHHFHSRLESASPSELRQSRVILCTCPHCPRHKQTPGVVQQTQL
FT QEAQNVQNVSEPRCPKGV"
FT gene 323. .1099
FT /gene="V1"
FT CDS 323. .1099
FT /codon_start=1
FT /gene="V1"
FT /product="V1 protein"
FT /protein_id="ADF56037.1"
FT /translation="MSKRPADIIISTPASKVRRRLNFDSPGLSSARAPTVLVTNKRRAW
FT SNRPNYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTKGSGLTH
FT RTGKRFTIKSIYILGKVWMDENIKKQNHTNNVMFFLVRDRRPYGNSPMDFGQVFNMFDN
FT EPSTATIKNDYRDRFQVMRKFSATVTGGPSGMKEQALVRRFFKINSQIVYNHQEAAKYE
FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN"
FT gene complement(1096. .1497)
FT /gene="C3"
FT CDS complement(1096. .1497)
FT /codon_start=1
FT /gene="C3"
FT /product="C3 protein"
FT /protein_id="ADF56038.1"
FT /translation="MDSRTGELITAHQTENGVLIWTINNPLYFKTIKEIRLTHGNQTMV
FT EMQIRFNYNLRKELGIHKCFMNFRVWTISRPPTGLFLNVFRKQIMKYLYRIGVISINNV
FT IRAVNHVLYDVLQTTVASEFTHNIQIKLY"
FT gene complement(1241. .1645)
FT /gene="C2"
FT CDS complement(1241. .1645)
FT /codon_start=1
FT /gene="C2"
FT /product="C2 protein"
FT /protein_id="ADF56039.1"
FT /translation="MRPSSPSQIRCTQVPIKVQHREAKKRAIRRRRIDIPCGCTVYVAF
FT TCRDNGFTHRGTHHCASDREWRTYLDNQQSPVFQNHKGDSSNARESNNGRDADKIQLQP
FT QEGIGDSQMFHELQGLDDLTPSDWSFLKRI"
FT gene complement(1545. .2633)
FT /gene="C1"
FT CDS complement(1545. .2633)
FT /codon_start=1
FT /gene="C1"
FT /product="C1 protein"
FT /protein_id="ADF56040.1"
FT /translation="MAPPHRFQIYAKNYFLTFPKCSLTKEEALEQIQQISTASNKKYIK
FT ICRELHEDGQPHLHVLLQFEGKFKCQNQRLFDLVSPNRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNAGSKAEALRVIRELAPKDFVLQFH
FT NLNSNLERIFQEPPAPYVSPFLSSSFDQVPEELEEWAAENVVEAAARPSRPISIVIEGE
FT SRTGKTVWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEDKNAHLKSWALKNATFITLSNPL
FT YSGTNQSPASGGQEESNQETQD"
FT gene complement(2183. .2476)
FT /gene="C4"
FT CDS complement(2183. .2476)
FT /codon_start=1
FT /gene="C4"
FT /product="C4 protein"
FT /protein_id="ADF56041.1"
FT /translation="MANLIYMCFSSSKGSSSAKIRDSSTWSPQIGQHISIQTFRELNPA
FT PTSSPTSTRMETHWNGENSRSTEDLQEEDNRAPMTLTPQRLTQEVRQRLLGL"
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SQ Sequence 2764 BP; 687 A; 612 C; 623 G; 842 T; 0 other;
gu945265 Length: 2764 03-MAY-2010 Type: N Check: 2271 ..
1 accggtgggc gcgaaaaaaa aaagtggtcc ccgccccacg tgaacatgtc
51 gcgcgagtgc tgaacatgtc gcgcgatgat gtccaatcag aacgcgcgct
101 ctacgcatta taatttgaaa tttgaaatat aaacttgctc cctaagtttg
151 gccggcataa ctatgtggga tccgttattg aacgacttcc ctgaatccgt
201 tcacggtttc cgttgtatgc tcgccgtgaa atatttgcag gctgttcgag
251 agacgtacga tccttccact cttgggtacg atcttcttag cgatctcatc
301 ggagttgttc gccgtaccaa ctatgtcgaa gcgaccagca gatatcatca
351 tttccactcc cgcctcgaaa gtgcgtcgcc gtctgaactt cgacagtccc
401 gggttatcct ctgcacgtgc ccccactgtc ctcgtcacaa acaaacgccg
451 ggcgtggtcc aacagaccca attacaggaa gcccagaatg tacagaatgt
501 atcggagccc agatgtccca aaggggtgtg aaggtccatg taaggtccag
551 tcatatgaac agcgtgatga tgtgaagcat actggtattg ttcgctgtgt
601 ttctgatgtg accaagggaa gtgggcttac tcatcgtact ggaaagcgtt
651 tcacaatcaa atctatttat attcttggta aggtatggat ggatgagaac
701 attaagaagc agaatcacac caacaatgtg atgtttttcc ttgttcgtga
751 tagaagaccg tatgggaatt ccccgatgga ttttggtcaa gtttttaaca
801 tgtttgataa tgagcccagt actgctacta taaagaatga ttatcgagat
851 cgtttccagg tgatgcgtaa gtttagtgct actgtaactg gtggtccttc
901 tgggatgaag gaacaggctc ttgttcgtag gttttttaag attaacagtc
951 agattgtgta taaccatcaa gaagctgcga agtatgagaa ccatactgag
1001 aatgctttgt tgttgtatat ggcatgtact catgcttcta atcctgtgta
1051 tgctacgtta aagatacgga tctacttcta cgattcggta tctaattaat
1101 acaattttat ttgaatattg tgggtgaatt cacttgccac tgttgtttgc
1151 aatacatcgt acaaaacatg attgactgcc ctaattacat tgttaattga
1201 aattacgcct attctataca aatatttcat aatctgcttc ctaaatacgt
1251 ttaagaaaag accagtcgga gggcgtgaga tcgtccagac cctgaagttc
1301 atgaaacatt tgtgaatccc caattccttc ctgaggttgt agttgaatct
1351 tatctgcatc tctaccattg tttgattccc gtgcgttaga cgaatctcct
1401 ttatggtttt gaaatacagg ggattgttga ttgtccagat aagtacgcca
1451 ttctctgtct gatgcgcagt gatgagttcc cctgtgcgtg aatccattgt
1501 ctctgcacgt gaaggctacg tataccgtgc aaccacaagg gatgtcaatc
1551 ctgcgtctcc tgattgctct cttcttggcc tcccgatgct ggactttgat
1601 tggtacctga gtacagcgga tttgagaggg tgatgaaggt cgcattcttt
1651 aatgcccagg atttgagatg cgcgttcttg tcctcgtcta aatactcttt
1701 ataggaggaa ttgggacctg gattgcagag gaagattgtt gggatgcccc
1751 ctttaatttg aactggcttc ccgtattttg tgttgctttg ccagtccttt
1801 tgtgccccca tgaactcctt aaagtgtttc agataatgcg ggtcaacatc
1851 atctatgacg ttataccatg cgtcattact gaacaccttt gggctcagat
1901 caagatgacc gcacagataa ttgtgaggcc caagacttct ggcccatacg
1951 gtctttcctg ttctgctttc cccttcaatc actatactaa tcggtctact
2001 tggccgcgca gcggcctcaa cgacgttctc cgccgcccat tcttcaagtt
2051 cttcaggaac ttggtcgaac gaagaagaca aaaaaggaga aacataagga
2101 gctggaggct cctgaaaaat cctctctaaa ttactattta aattatgaaa
2151 ttgtaaaaca aaatctttgg gagctaactc ccttataacc ctaagagcct
2201 ctgccttact tcctgcgtta agcgctgcgg cgtaagcgtc attggcgctc
2251 tgttgtcctc ctcttgcaga tcttccgtcg atctggaatt ctccccattc
2301 cagtgtgtct ccatccttgt cgatgtagga cttgacgtcg gagctggatt
2351 tagctccctg aatgtttgga tggaaatgtg ctgacctatt tggggagacc
2401 aggtcgaaga gtctctgatt ttggcacttg aacttccctt cgaactggag
2451 aagcacatgt agatgaggtt ggccatcctc gtgaagctct ctgcagatct
2501 tgatatattt cttgtttgaa gctgtgctta tttgctgtat ttgctctagg
2551 gcttcctctt ttgttagaga acattttggg aaagttagga aataattctt
2601 ggcatatatt tggaatctgt ggggaggagc cattgacttg gtcaatcggt
2651 actcagatgc ttctctccaa tatatcggta ctcaatatat agtgagtgcc
2701 aaatggcatt ttggtaaaaa tcccaataat tttgaacccc catagcgccc
2751 accgttctaa tatt