Sequence of DPV Faba bean necrotic stunt virus
Faba bean necrotic stunt virus isolate Holetta-1997 segment DNA-N, complete sequence.
ACC No: GU983870
Dated: 2010-06-27 | Length: 980 | CRC: 756799343
ID GU983870; SV 1; circular; genomic DNA; STD; VRL; 980 BP. XX AC GU983870; XX DT 27-JUN-2010 (Rel. 105, Created) DT 27-JUN-2010 (Rel. 105, Last updated, Version 1) XX DE Faba bean necrotic stunt virus isolate Holetta-1997 segment DNA-N, complete DE sequence. XX KW . XX OS Faba bean necrotic stunt virus OC Viruses; ssDNA viruses; Nanoviridae; Nanovirus. XX RN [1] RP 1-980 RA Grigoras I., Timchenko T., Grande-Perez A., Katul L., Vetten H.-J., RA Gronenborn B.; RT "High Variability and Rapid Evolution of a Nanovirus"; RL J. Virol. 0:0-0(2010). XX RN [2] RP 1-980 RA Grigoras I., Gronenborn B.; RT ; RL Submitted (08-MAR-2010) to the EMBL/GenBank/DDBJ databases. RL Institut des Sciences du Vegetal, Centre National de la Recherche RL Scientifique, Gif sur Yvette 91198, France XX CC GenBank Accession Numbers GU983866-GU983873 represent the complete CC genome of Faba bean necrotic stunt virus isolate Holetta-1997. XX FH Key Location/Qualifiers FH FT source 1. .980 FT /organism="Faba bean necrotic stunt virus" FT /segment="DNA-N" FT /host="Vicia faba" FT /strain="Ethiopia:Holetta" FT /isolate="Holetta-1997" FT /mol_type="genomic DNA" FT /country="Ethiopia:Holetta" FT /isolation_source="plant tissue" FT /collected_by="K.M. Makkouk" FT /collection_date="Oct-1997" FT /identified_by="L. Katul and H.-J. Vetten" FT /note="acronym: FBNSV-[ET:Hol] DNA-N" FT /db_xref="taxon:283824" FT stem_loop join(961. .980,1. .13) FT /note="part of replication origin" FT misc_feature join(974. .980,1. .2) FT /note="conserved nonanucleotide at replication origin" FT misc_feature 1 FT /note="first base of viral (+) strand" FT TATA_signal 283. .289 FT CDS 336. .797 FT /codon_start=1 FT /product="nuclear shuttle protein" FT /protein_id="ADJ00310.1" FT /translation="MADWFSSPLKTCTHVCDFPSLAGNPQQEIMCCDSMKDKLNDSRKV FT LLVSCSVSFNGSFYGGNRNVRGQLQISMMEDDGVCRPIGYLPIGGYLYHNDYGYYEGQR FT TFNLDIESQYLKKDEDYRRKFIITVLNENGLDSQCDLKMFIVHSLRIKV" FT polyA_signal 818. .823 XX SQ Sequence 980 BP; 270 A; 170 C; 215 G; 325 T; 0 other; gu983870 Length: 980 27-JUN-2010 Type: N Check: 3907 .. 1 acccccgccc caggttcagc ggagtcattg agactccatc tcagccgttc 51 attgaataga cacgtgtaca atcaggatct gtgattcgtg aagcgaatct 101 gacggaagat tgtacactat tctctatctc attaatacgc gtggcaagct 151 ctcattggat attgagttag tgggaatctt atcttttcac gcggtttgct 201 tttaacgcgc tttgctttta agtgggtcct atattacttt cgttccacga 251 aagcacgtgc tatcttctca aggaagcttt ggtatatatc gtctttaaat 301 acaaagcttc ttcttcgttt ggaagttgca gaaaaatggc agattggttt 351 tctagtcctt tgaagacatg tacacacgtc tgcgacttcc cttctcttgc 401 tggaaatcca cagcaagaga ttatgtgttg tgatagcatg aaagacaagc 451 tcaacgattc aagaaaggtt ctgcttgtta gttgcagtgt gagcttcaat 501 ggtagtttct atggtggaaa caggaacgtt cgtggtcagt tgcagatatc 551 tatgatggaa gacgacggtg tttgtcgacc aattggatat ttaccaattg 601 gtggttatct gtatcataat gattatggct attacgaagg tcagaggacg 651 tttaatctcg acatcgagtc tcagtatttg aagaaagatg aagattatag 701 aagaaaattt ataattaccg ttcttaatga gaacgggtta gatagtcagt 751 gtgatttgaa aatgtttatt gtacattcac tcagaatcaa agtgtaatta 801 gttgtgatga tgtaattaat aatacttgtt attactgact aatatcattt 851 atattattat tattgttttt aattactctg cgaagctata tgtctcagcc 901 caataggccc aatagtctta aggcccaata gaagatgacg tcatttgatc 951 ccgtgctgag ctggggcggg gcttagtatt