Sequence of DPV Barley yellow dwarf virus-PAV

Barley yellow dwarf virus-PAV ORF3 gene for coat protein, genomic RNA, isolate M12, clone 22AG

ACC No: HE584722

Dated: 2012-11-30 | Length: 603 | CRC: -913181574

                
ID   HE584722; SV 1; linear; genomic RNA; STD; VRL; 603 BP.
XX
AC   HE584722;
XX
DT   30-NOV-2012 (Rel. 115, Created)
DT   30-NOV-2012 (Rel. 115, Last updated, Version 1)
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DE   Barley yellow dwarf virus-PAV ORF3 gene for coat protein, genomic RNA,
DE   isolate M12, clone 22AG
XX
KW   .
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OS   Barley yellow dwarf virus-PAV
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
XX
RN   [1]
RP   1-603
RA   Tahir M.;
RT   ;
RL   Submitted (26-AUG-2011) to the INSDC.
RL   NUST Center of Virology & Immunology, National University of Sciences &
RL   Technology, NCVI, 44000, PAKISTAN.
XX
RN   [2]
RA   Ali M., Tahir M., Hameed S., Qadri I.;
RT   "Engineering resistance against Barley yellow dwarf virus by expression of
RT   viral derived gene(s) in a model plant";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .603
FT                   /organism="Barley yellow dwarf virus-PAV"
FT                   /host="Avena sativa"
FT                   /isolate="M12"
FT                   /mol_type="genomic RNA"
FT                   /country="Pakistan:Peshawar"
FT                   /isolation_source="host leaves"
FT                   /collection_date="09-Jan-2011"
FT                   /clone="22AG"
FT                   /db_xref="taxon:12040"
FT   CDS             1. .603
FT                   /transl_table=1
FT                   /gene="ORF3"
FT                   /product="coat protein"
FT                   /function="encapsidation"
FT                   /protein_id="CCD30996.1"
FT                   /translation="MNSVGRRGPRRANRNGAGRRRRRAIRPVVVVQPNRAGPRRRNGRR
FT                   TGRRGPNSILGQAGRTEVFVFSVDNLKANSSGTIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRIEFKSHASATTSGAIFIELDTACKQSALGSYINSFTISKTASKSFRAEAINGKEF
FT                   QESTIDQFWLLYKANGTTTDTAGQFIIRINVSMLTPK"
XX
SQ   Sequence 603 BP; 180 A; 158 C; 139 G; 126 T; 0 other;

he584722 Length: 603  30-NOV-2012  Type: N  Check: 8017  ..

       1  atgaattcag taggccgtag gggacctaga cgagcaaatc gaaatggcgc
      51  aggaaggcgg cgccgtcgag caattcggcc agtggttgtg gtccaaccca
     101  atcgagcagg acccagacga cgaaatggtc gtcgcacagg aagaagaggg
     151  ccaaattcta tacttggaca agcaggcagg actgaggtat tcgtattctc
     201  agtcgacaac cttaaagcca actcttccgg gacaatcaaa ttcggtccca
     251  gtctatcgca atgcccagcg ctttcagacg gaatacttaa gtcctaccat
     301  cgttacaaga tcacaagtat ccgtattgag tttaagtcac acgcgtccgc
     351  cactacgtcg ggcgctatct ttattgaact cgacaccgcg tgcaagcaat
     401  cagccctggg tagctacatt aattccttca ccatcagcaa aaccgcctcc
     451  aagtccttca gagccgaggc gattaacggc aaggaattcc aggaatcaac
     501  gattgaccaa ttctggctac tctacaaggc aaatgggaca actactgaca
     551  cagcaggaca atttatcata agaattaatg tcagtatgct aactcccaaa
     601  tag