Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus CP gene for coat protein, genomic RNA, isolate Rw19

ACC No: HE654706

Dated: 2012-02-10 | Length: 720 | CRC: -1792969098

                
ID   HE654706; SV 1; linear; genomic RNA; STD; VRL; 720 BP.
XX
AC   HE654706;
XX
DT   10-FEB-2012 (Rel. 111, Created)
DT   10-FEB-2012 (Rel. 111, Last updated, Version 1)
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DE   Rice yellow mottle virus CP gene for coat protein, genomic RNA, isolate
DE   Rw19
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KW   .
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
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RN   [1]
RP   1-720
RA   Hebrard E.;
RT   ;
RL   Submitted (24-JAN-2012) to the INSDC.
RL   RPB, IRD, 911 av Agropolis BP64501, 34080 Montpellier, FRANCE.
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RN   [2]
RC   sequenced in this study
RA   Ndikumana I., Gasore R., Issaka S., Pinel-Galzi A., Onasanya A.,
RA   Hassani-Mehraban A., Fargette D., Peters D., Sere Y.;
RT   "Rice yellow mottle virus in rice in Rwanda: first report and evidence of
RT   strain circulation";
RL   (misc) New Dis. Rep. 23:18-18(2011).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Rw19"
FT                   /mol_type="genomic RNA"
FT                   /country="Rwanda"
FT                   /db_xref="taxon:31744"
FT   CDS             1. .720
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CCF79534.1"
FT                   /translation="MARKGKKTNSNQGQQGKKKSRRPRGRSAEPRLQRAPVAQASRISG
FT                   TVPGPLSSNTWPVHSVEFLMDFKRSATSADATTFNCVPFNLPRVWSLARCYSMWKPTRW
FT                   DVIYLPEVSAATAGSIEMCYLYDYADAIPSDTGKMSRTSGFVTSSVWYGAEGCHLLSGG
FT                   TARNAVVASMDCSRVGWKRVTSSIPDSVDPNVVNTILPARLAVRSSIKPTVDDVPGKLY
FT                   VIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 157 A; 190 C; 212 G; 161 T; 0 other;

he654706 Length: 720  10-FEB-2012  Type: N  Check: 9840  ..

       1  atggccagga agggcaagaa aaccaactcc aaccagggcc agcaaggaaa
      51  gaagaagagt cggcgccctc gtggtcgttc ggcggagccc cggcttcaac
     101  gggctccagt ggctcaggcc tcccggatat ctgggacggt tcctggacca
     151  ctatcttcta acacctggcc ggtccactcc gtggaattcc tgatggattt
     201  taagcggagt gccacatcgg cggatgcgac gacattcaat tgtgtgccgt
     251  tcaatctgcc tcgggtgtgg agtcttgcgc gttgttactc aatgtggaag
     301  ccaacacggt gggacgtcat ttatctccct gaggtgagtg ctgcaacagc
     351  tggaagtatc gagatgtgct atctctacga ctatgctgat gccatcccaa
     401  gtgacacggg caagatgagc aggacgtcgg gcttcgtgac ctctagcgtt
     451  tggtacggcg ctgagggctg ccacttgtta agtggcggca cagcacgaaa
     501  tgccgtggtc gcctcgatgg attgttctcg agtcggctgg aaacgcgtta
     551  ccagttcaat acctgatagc gtggatccca acgtcgtaaa caccatactg
     601  ccggctaggc tagccgtgcg atcgtcgatc aaaccgacgg ttgatgatgt
     651  tccggggaaa ctctatgtca tcgtcagtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga