Sequence of DPV Canna yellow streak virus

Canna Yellow Streak Virus partial gene for polyprotein, coat protein region, genomic RNA, isolate K2, clone 6-1

ACC No: HE774737

Dated: 2012-05-10 | Length: 861 | CRC: 28702974

                
ID   HE774737; SV 1; linear; genomic RNA; STD; VRL; 861 BP.
XX
AC   HE774737;
XX
DT   10-MAY-2012 (Rel. 112, Created)
DT   10-MAY-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Canna Yellow Streak Virus partial gene for polyprotein, coat protein
DE   region, genomic RNA, isolate K2, clone 6-1
XX
KW   .
XX
OS   Canna Yellow Streak Virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-861
RA   Laprom A.;
RT   ;
RL   Submitted (10-MAR-2012) to the INSDC.
RL   Kasetsart University, Plant Pathology, Nakon Pathom, 73140, THAILAND.
XX
RN   [2]
RA   Laprom A.;
RT   "The detection of Canna yellow streak virus in Thai canna rhizome and plant
RT   part by PCR";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .861
FT                   /organism="Canna Yellow Streak Virus"
FT                   /host="Canna indica"
FT                   /isolate="K2"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="host leaves"
FT                   /clone="6-1"
FT                   /db_xref="taxon:433462"
FT   CDS             <1. .>861
FT                   /product="polyprotein"
FT                   /note="coat protein region"
FT                   /protein_id="CCG55101.1"
FT                   /translation="ATEDAGVVADDDKVKKVDAKDSSKNTGGTKDKGNTSIANVDNPGG
FT                   QEVKSVEKDVDTGTVGKFTIPKLKKVSPKMRLPRIGNQTLLNIEHLITYEPDQRDISNT
FT                   RATHSQFKQWYEQIKKEYDVDDDQMQIILNGFMVWAIENGTSPNVNGYWVMMDDQEQVE
FT                   YPLKPIVEHAKPTLRQCMMHSSDAAEAYIEMRNLKQPYMPRYGLLRNLNDKSLARFAFD
FT                   FYEVTSRTPNRAREAHAQMKAASIHGGTNNLFGLDGNVGETSENTERHVATDVTKNTHS
FT                   YRGAQL"
XX
SQ   Sequence 861 BP; 306 A; 168 C; 207 G; 180 T; 0 other;

he774737 Length: 861  10-MAY-2012  Type: N  Check: 9521  ..

       1  gcaactgaag atgcgggagt tgttgctgac gatgacaagg tgaagaaagt
      51  ggatgctaaa gatagcagca agaatactgg aggaaccaag gacaagggaa
     101  acacgtcaat tgcaaatgtt gacaatccag gtggacaaga ggtcaagtct
     151  gtggagaagg atgttgacac agggacggtt ggcaagttta ccatcccgaa
     201  gttgaagaaa gtgtcaccaa aaatgcgact accaagaatt ggaaatcaaa
     251  cgctattgaa catcgagcat ctcataacat atgaaccgga ccaacgtgac
     301  atttcaaaca cacgagccac gcattcacag ttcaaacagt ggtatgagca
     351  aatcaagaag gaatacgatg tggacgatga ccaaatgcaa attattctca
     401  atggctttat ggtttgggca attgagaatg gaacatcacc aaacgtcaac
     451  ggatattggg taatgatgga tgatcaagaa caagtagaat acccacttaa
     501  accaattgtg gaacacgcca aacccacatt gcgtcagtgt atgatgcatt
     551  ccagtgatgc agcagaagca tatattgaaa tgagaaatct caagcaaccg
     601  tacatgccca gatacggttt actcaggaac ttgaatgata aaagcctcgc
     651  acgcttcgca tttgattttt atgaagtaac ttcacgaaca ccaaatcgag
     701  cacgggaagc acatgcacag atgaaagcag catcaatcca tggaggaacg
     751  aacaacttat ttggattaga tggaaatgtt ggcgaaactt ctgagaacac
     801  ggagagacat gtggcaacag atgtaactaa gaatacgcac tcgtatcgcg
     851  gtgcgcagct t