Sequence of DPV Pepper huasteco yellow vein virus

Pepper huasteco yellow vein virus cp gene for coat protein, isolate PHDZI03W2007

ACC No: HE967649

Dated: 2013-04-12 | Length: 756 | CRC: -1961206303

                
ID   HE967649; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967649;
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DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
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DE   Pepper huasteco yellow vein virus cp gene for coat protein, isolate
DE   PHDZI03W2007
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KW   .
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OS   Pepper huasteco yellow vein virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
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RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper huasteco yellow vein virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PHDZI03W2007"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Yucatan, Dzibilchaltun"
FT                   /collection_date="2007"
FT                   /db_xref="taxon:223303"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0N0X5"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:K0N0X5"
FT                   /protein_id="CCJ67970.1"
FT                   /translation="MPKRDAPWRLTAGTAKISRTGDSSQALIMGPSTSRTSASVNRPMY
FT                   RKPRIYRMYRSPDVPKGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRVYFYDSIMN"
XX
SQ   Sequence 756 BP; 207 A; 153 C; 188 G; 208 T; 0 other;

he967649 Length: 756  12-APR-2013  Type: N  Check: 1194  ..

       1  atgcctaagc gtgatgctcc ttggcgatta acagcgggga ccgcaaagat
      51  tagtcgaact ggcgacagtt cacaggctct gatcatgggc ccgagtacta
     101  gcaggacctc agcttcggtt aatcgaccaa tgtacaggaa gccccggatt
     151  tatcgtatgt atagatctcc ggatgtgccg aaaggttgtg aagggccgtg
     201  taaggtccaa tcgtttgaac aacgacatga tgtctcccat gttggtaagg
     251  ttatttgtat atccgacgtc actcgtggta atggtattac ccatcgtgtt
     301  ggcaaacgat tttgcgttaa gtccgtctac attcttggca aaatctggat
     351  ggatgaaaat attaagttga agaaccatac caacagtgtc atgttttggt
     401  tggttaggga tcggagaccc tacggtacgc ctatggattt tggccaagtt
     451  tttaatatgt atgacaatga gcccagcacc gccactgtga agaacgatct
     501  tcgggatcgt tatcaagtta tgcataggtt ctatgctaag gtcacaggtg
     551  ggcaatatgc cagcaacgag caagctttgg ttaggcgttt ctggaaggtc
     601  aacaaccatg ttgtgtacaa ccatcaggaa gctggcaaat atgagaacca
     651  cactgagaat gcgctgttat tgtatatggc atgtacgcat gcatcaaatc
     701  ctgtatatgc aacactcaaa attcgggtct atttttatga ctcgataatg
     751  aattaa