Sequence of DPV Cotton leaf curl Multan alphasatellite

Cotton leaf curl Burewala alphasatellite clone Jit 9, complete sequence.

ACC No: HM004548

Dated: 2010-05-09 | Length: 1368 | CRC: -505118077

                
ID   HM004548; SV 1; circular; genomic DNA; STD; VRL; 1368 BP.
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AC   HM004548;
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DT   09-MAY-2010 (Rel. 104, Created)
DT   09-MAY-2010 (Rel. 104, Last updated, Version 1)
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DE   Cotton leaf curl Burewala alphasatellite clone Jit 9, complete sequence.
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KW   .
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OS   Cotton leaf curl Burewala alphasatellite
OC   Viruses; Satellites; unclassified Satellites;
OC   Begomovirus-associated alphasatellites.
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RN   [1]
RP   1-1368
RA   Kumar J., Kumar A., Khan J.A.;
RT   ;
RL   Submitted (14-MAR-2010) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology Lab, National Botanical Research Institute, Rana Pratap
RL   Marg, Lucknow, Uttar Pradesh 226001, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1368
FT                   /organism="Cotton leaf curl Burewala alphasatellite"
FT                   /host="Abelmoschus esculentus"
FT                   /isolate="Bihar"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /isolation_source="leaf tissue"
FT                   /clone="Jit 9"
FT                   /note="acronym: CLCuBwA"
FT                   /db_xref="taxon:713091"
FT   gene            78. .1025
FT                   /gene="alpha rep"
FT   CDS             78. .1025
FT                   /codon_start=1
FT                   /gene="alpha rep"
FT                   /product="replication protein"
FT                   /protein_id="ADG04779.1"
FT                   /translation="MPTIQSQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGKRSFSQVKALFGDLNPHLEKQRARKTDEARDYCMKEETRVSGPFEF
FT                   GDYCPAGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAKEIQISNLKSW
FT                   QSRLKTLLERDPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   EKISVDRVHVIPCIPCGVCLKHHVGEIKCEEYLE"
XX
SQ   Sequence 1368 BP; 405 A; 257 C; 320 G; 386 T; 0 other;

hm004548 Length: 1368  09-MAY-2010  Type: N  Check: 3887  ..

       1  acccagcctc ggttccctct ccttgtgttc cctcgtgctt ttcacgtgct
      51  ctctctcttc tgtgttttta agcgaagatg cctactattc agtcacaatg
     101  gtggtgtttt actgtcttct tcctttctgc gaccgctccc gatctggttc
     151  ctctcttcga gaacacccac gttagttacg cctgctggca ggaagaagag
     201  tcgccgacga ctcgacgacg ccacttgcag ggctacctgc aattgaaggg
     251  gaaaagaagc ttttcgcagg ttaaggcact gttcggagac ctgaaccccc
     301  acctggagaa acaacgtgcg cgtaagaccg acgaagctcg ggattactgt
     351  atgaaagagg aaactagggt ttccggtcct tttgaatttg gggattactg
     401  tcctgctggt tctcacaaac gacgacaacg agaatctgta attcgaagtc
     451  cggtgagaat ggctgaggag aatccgtccg tcttccgacg agtcaaggca
     501  aagattgctg aggaagaatt ccagaagacc gccaaggaga ttcaaatttc
     551  aaatttgaaa tcttggcaat cgcgcctgaa gacgctcctc gaacgggacc
     601  cagatgaccg cactatcttc tgggtttacg gacctgatgg tggggaagga
     651  aaatccacct ttgccagaga cctgtacaga agtgggtcct ggttctatac
     701  acgtggagga tctgcagata atgtagctta ccagtacata ggatgtttag
     751  ggaataatat tgtatttgat attcctcgtg ataagaagga ttatctacaa
     801  tacagtttaa tagagatgtt taaggataga ttaatagtta gtaataagta
     851  tgagcctctg atggctccct taattaattg tatccatgta gttgtgatgt
     901  ctaattttct cccagacttt gagaagatta gcgtagatag agtccatgta
     951  atcccatgta ttccttgtgg tgtttgtctt aagcatcatg ttggtgaaat
    1001  aaaatgtgag gaatatttgg aataatctga gatgtttacc gtataataga
    1051  ttatattaaa gagagaaggg ccgcgcagcg gcaataacat gagtaatttt
    1101  gcttcttgaa aacgagaagg aatgaaatga aaaaagaaat aaaaaaaaat
    1151  tgtaatataa agatgtggga cccacattta tattgaaata aaaataaata
    1201  taaaaataac taaataaata tcactattca ttttgcggaa ggacataatt
    1251  gtaaataatg aaagttttgg gtaacgcggt gtaattttaa aagactttag
    1301  ggtgtgcgct tgcaatttgc cgggatccta ggatataaat aacacgtcac
    1351  cgaggctggt gtagtatt