Sequence of DPV Zucchini yellow mosaic virus

Zucchini yellow mosaic virus isolate 11spno3 polyprotein gene, partial cds; and 3' UTR.

ACC No: HM005309

Dated: 2010-09-07 | Length: 1684 | CRC: -2024939260

                
ID   HM005309; SV 1; linear; genomic RNA; STD; VRL; 1684 BP.
XX
AC   HM005309;
XX
DT   09-MAY-2010 (Rel. 104, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Zucchini yellow mosaic virus isolate 11spno3 polyprotein gene, partial cds;
DE   and 3' UTR.
XX
KW   .
XX
OS   Zucchini yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1684
RA   Tsai W.S., Abdourhamane I.K., Knierim D., Wang J.T., Kenyon L.;
RT   "First Report of Zucchini yellow mosaic virus Associated with Leaf Crinkle
RT   and Yellow Mosaic Diseases of Cucurbit Plants in Mali";
RL   Plant Dis. 94(7):923-923(2010).
XX
RN   [2]
RP   1-1684
RA   Tsai W.S., Abdourhamane I.K., Knierim D., Wang J.T., Kenyon L.;
RT   ;
RL   Submitted (15-MAR-2010) to the EMBL/GenBank/DDBJ databases.
RL   Virology, AVRDC-The World Vegetable Center, PO Box 42, Shanhua, Tainan,
RL   Taiwan 74199, ROC
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1684
FT                   /organism="Zucchini yellow mosaic virus"
FT                   /host="cucumber, diseased"
FT                   /isolate="11spno3"
FT                   /mol_type="genomic RNA"
FT                   /country="Mali"
FT                   /collection_date="07-Apr-2009"
FT                   /db_xref="taxon:12232"
FT   CDS             <1. .1473
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains CP"
FT                   /db_xref="GOA:D6QSX5"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:D6QSX5"
FT                   /protein_id="ADG01846.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVISIYYACMKFGWNCEEIENKLVFFANG
FT                   DDLILAVKDEDSGLLDNMSSSFCELGLNYDFSERTHKREDLWFMSHQAMLVDGMYIPKL
FT                   EKERIVSILEWDRSKEIMHRTEAICAAMIEAWGHTELLQEIRKFYLWFVEKEEVRELAA
FT                   LGKAPYIAETALRKLYTDKGADTSELARYLQALHQDIFFEQGDTVMLQSGTQPTVADAG
FT                   ATKKDKEDDKGKNKDVTGSGSGEKTVAAVTKDKDVNAGSHGKIVPRLSKITKKMSLPRV
FT                   KGNVILDIDHLLEYKPDQIELYNTRASHQQFASWFNQVKTEYDLNEQQMGVVMNGFMVW
FT                   CIENGTSPDINGVWVMMDGNEQVEYPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNAE
FT                   APYMPRYGLLRNLRDRSLARYAFDFYEVNSKTPERAREAVAQMKAAALSNVSSRLFGLD
FT                   GNVATTSEDTERHTARDVNRNMHTLLGVNTMQ"
XX
SQ   Sequence 1684 BP; 510 A; 333 C; 417 G; 424 T; 0 other;

hm005309 Length: 1684  07-SEP-2010  Type: N  Check: 2988  ..

       1  ggaaacaaca gcgggcaacc ctcaacagtg gtggacaaca cactaatggt
      51  tgtgatctcc atttactatg cgtgcatgaa atttggttgg aactgcgagg
     101  aaattgagaa taaacttgtc ttctttgcaa atggagatga tctgatactt
     151  gcagtcaaag atgaggatag cggcttactt gataacatgt catcctcttt
     201  ttgcgaactt ggactgaatt atgatttttc agaacgtacg cacaaaagag
     251  aggatctttg gttcatgtcc caccaagcaa tgctagttga tggaatgtac
     301  attcctaaac tcgagaaaga gagaattgtt tccattctag agtgggatag
     351  aagcaaagaa attatgcacc gaacagaggc tatctgcgct gcgatgattg
     401  aggcatgggg gcacaccgag ctcttgcaag aaatcagaaa gttttaccta
     451  tggttcgttg aaaaagaaga agtgcgagag ttggcagccc tcggaaaagc
     501  tccatacata gctgagacag cacttcgtaa gttatacact gacaaggggg
     551  cggatacaag tgaactggca cgctacctac aagccctcca tcaagacatc
     601  ttctttgaac aaggagacac tgtgatgctc caatcaggca ctcagccaac
     651  tgtggcagat gctggagcta caaagaaaga caaagaagat gacaaaggga
     701  aaaacaagga tgttacaggc tccggctcag gtgagaaaac agtagcagct
     751  gtcacgaagg acaaggatgt gaatgctggt tctcatggga aaattgtgcc
     801  gcgtctttcg aagattacaa agaaaatgtc actgccacgc gtgaaaggaa
     851  atgtgatact cgatattgat catttgctgg aatataaacc ggatcaaatt
     901  gagttataca acacgcgggc gtctcatcag cagttcgcct cttggttcaa
     951  ccaggttaag acggaatatg atttgaacga gcaacagatg ggagttgtaa
    1001  tgaatggttt catggtttgg tgcattgaaa atggcacttc tcccgacatc
    1051  aatggagtgt gggttatgat ggacggaaat gaacaggttg agtatccttt
    1101  gaaaccaata gttgaaaacg caaagccaac gctgcggcaa ataatgcatc
    1151  atttttcaga tgcagcggag gcatatatag agatgagaaa tgcagaggca
    1201  ccatacatgc cgaggtatgg tttgcttcga aacctacggg ataggagttt
    1251  agcacgatat gctttcgact tctatgaagt caattctaaa actcctgaaa
    1301  gagcccgcga agctgttgcg cagatgaaag cagcagctct tagcaatgtt
    1351  tcttcaaggt tgtttggcct tgatggaaat gttgccacca ctagcgaaga
    1401  cactgaacgg cacactgcac gtgatgttaa cagaaacatg cacaccttac
    1451  taggtgtgaa tacaatgcag taaagggtag gccgcctacc taggttatcg
    1501  tttcgctgcc gacgtaattc taatatttac cgctttactt gatatcttta
    1551  gatttctaga gtgggcttcc cacctttaaa gcgttaagtt tatgttagtt
    1601  gtccaggagt gccgtagtcc tgtcggaagc tttagtgtga gcctctcacg
    1651  aataagctcg agattagact ccgtttgcaa gcct